Conservation of cofitness between Pf1N1B4_1186 and Pf1N1B4_2176 in Pseudomonas fluorescens FW300-N1B4

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1186 L-lactate permease 1.0 Pf1N1B4_2176 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.33 13
Pseudomonas fluorescens SBW25 0.96 PFLU_RS25945 L-lactate permease 0.79 PFLU_RS29255 iron donor protein CyaY low > 109
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS25945 L-lactate permease 0.79 PFLU_RS29255 iron donor protein CyaY low > 109
Pseudomonas simiae WCS417 0.96 PS417_24105 D-lactate transporter (lctP family) (from data) 0.80 PS417_27570 frataxin — —
Pseudomonas sp. RS175 0.94 PFR28_00063 Glycolate permease GlcA 0.92 PFR28_04373 Iron-sulfur cluster assembly protein CyaY low > 88
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_3380 L-lactate permease 0.97 Pf6N2E2_4422 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly low > 103
Pseudomonas fluorescens FW300-N2C3 0.94 AO356_07550 L-lactate and D-lactate permease (lctP family) (from data) 0.95 AO356_12745 iron donor protein CyaY 0.57 9
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_5114 L-lactate permease 0.95 PfGW456L13_848 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly low > 87
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_05700 L-lactate permease 0.95 AO353_09030 iron donor protein CyaY low > 101
Pseudomonas putida KT2440 0.90 PP_4735 L-lactate permease 0.79 PP_5225 frataxin low > 96
Pseudomonas sp. S08-1 0.82 OH686_17015 L-lactate permease 0.67 OH686_13815 iron donor protein CyaY low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00732 Glycolate permease GlcA 0.41 OHPLBJKB_04246 Iron-sulfur cluster assembly protein CyaY low > 73
Escherichia fergusonii Becca 0.75 EFB2_00840 Glycolate permease GlcA 0.36 EFB2_04831 Iron-sulfur cluster assembly protein CyaY low > 86
Escherichia coli ECRC62 0.75 BNILDI_00565 glcA glycolate permease GlcA 0.36 BNILDI_04950 cyaY iron donor protein CyaY — —
Escherichia coli ECOR38 0.75 HEPCGN_18025 glcA glycolate permease GlcA 0.36 HEPCGN_13160 cyaY iron donor protein CyaY low > 87
Escherichia coli BW25113 0.75 b2975 yghK glycolate transporter (NCBI) 0.36 b3807 cyaY frataxin-like protein (NCBI) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_10950 glcA glycolate permease GlcA 0.36 NOLOHH_06585 cyaY iron donor protein CyaY low > 75
Escherichia coli Nissle 1917 0.75 ECOLIN_RS17115 glycolate permease GlcA 0.42 ECOLIN_RS21845 iron donor protein CyaY low > 55
Escherichia coli BL21 0.75 ECD_02843 glycolate transporter 0.36 ECD_03682 iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein — —
Cupriavidus basilensis FW507-4G11 0.69 RR42_RS21280 L-lactate permease 0.28 RR42_RS19045 frataxin low > 128
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS10155 lactate permease LctP family transporter 0.28 QEN71_RS28070 iron donor protein CyaY low > 153
Shewanella oneidensis MR-1 0.68 SO0827 lldP propionate/L-lactate/D-lactate transporter (from data) 0.31 SO4311 cyaY cyay protein (NCBI ptt file) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF411 L-lactate permease 0.42 GFF233 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.43 21
Escherichia coli ECRC98 0.63 JDDGAC_19405 lldP L-lactate permease 0.36 JDDGAC_18065 cyaY iron donor protein CyaY low > 86
Escherichia coli ECRC102 0.63 NIAGMN_13540 lldP L-lactate permease 0.36 NIAGMN_12195 cyaY iron donor protein CyaY — —
Escherichia coli ECRC101 0.63 MCAODC_06290 lldP L-lactate permease 0.36 MCAODC_04945 cyaY iron donor protein CyaY low > 87
Escherichia coli ECRC100 0.63 OKFHMN_15780 lldP L-lactate permease 0.36 OKFHMN_14440 cyaY iron donor protein CyaY low > 80
Escherichia coli ECRC99 0.63 KEDOAH_12370 lldP L-lactate permease 0.36 KEDOAH_13710 cyaY iron donor protein CyaY — —
Enterobacter sp. TBS_079 0.62 MPMX20_00131 L-lactate permease 0.36 MPMX20_04468 Iron-sulfur cluster assembly protein CyaY low > 85
Enterobacter asburiae PDN3 0.62 EX28DRAFT_3853 L-lactate transport 0.34 EX28DRAFT_4476 iron donor protein CyaY — —
Klebsiella michiganensis M5al 0.62 BWI76_RS27185 L-lactate/D-lactate permease (from data) 0.36 BWI76_RS01190 iron donor protein CyaY low > 92
Paraburkholderia graminis OAS925 0.31 ABIE53_002860 lactate permease 0.28 ABIE53_003747 CyaY protein — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_00392 lactate permease 0.26 H281DRAFT_05608 CyaY protein — —
Burkholderia phytofirmans PsJN 0.29 BPHYT_RS13235 lactate permease 0.28 BPHYT_RS17920 protein CyaY low > 109
Dickeya dianthicola ME23 0.23 DZA65_RS12780 L-lactate permease 0.42 DZA65_RS21110 iron donor protein CyaY low > 75
Dickeya dianthicola 67-19 0.23 HGI48_RS12340 L-lactate permease 0.40 HGI48_RS20065 iron donor protein CyaY — —
Dickeya dadantii 3937 0.23 DDA3937_RS12250 L-lactate permease 0.41 DDA3937_RS19910 iron donor protein CyaY low > 74
Shewanella amazonensis SB2B 0.15 Sama_2439 L-lactate permease, putative (RefSeq) 0.33 Sama_3252 CyaY protein (RefSeq) — —
Pseudomonas stutzeri RCH2 0.15 Psest_0955 D,L-lactate:H+ symporter (from data) 0.67 Psest_3762 iron donor protein CyaY low > 67
Vibrio cholerae E7946 ATCC 55056 0.15 CSW01_19030 L-lactate permease 0.42 CSW01_00625 iron donor protein CyaY — —
Shewanella loihica PV-4 0.14 Shew_3135 L-lactate permease (RefSeq) 0.33 Shew_0320 frataxin family protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.14 Shewana3_2904 propionate/L-lactate/D-lactate transporter (from data) 0.31 Shewana3_0388 frataxin family protein (RefSeq) low > 73
Serratia liquefaciens MT49 0.11 IAI46_20615 L-lactate permease 0.35 IAI46_00705 iron donor protein CyaY low > 86

Not shown: 13 genomes with orthologs for Pf1N1B4_1186 only; 15 genomes with orthologs for Pf1N1B4_2176 only