Conservation of cofitness between Pf1N1B4_2147 and Pf1N1B4_2132 in Pseudomonas fluorescens FW300-N1B4

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_2147 Putrescine utilization regulator 1.0 Pf1N1B4_2132 Aldehyde dehydrogenase (EC 1.2.1.3) 0.41 6
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS29365 cupin domain-containing protein 0.92 PFLU_RS29420 aldehyde dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.99 PFLU_RS29365 cupin domain-containing protein 0.92 PFLU_RS29420 aldehyde dehydrogenase low > 109
Pseudomonas simiae WCS417 0.99 PS417_27690 XRE family transcriptional regulator 0.92 PS417_27745 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 88
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_4394 Putrescine utilization regulator 0.94 Pf6N2E2_4383 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 103
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_12635 XRE family transcriptional regulator 0.94 AO356_12580 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 104
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_09140 XRE family transcriptional regulator 0.96 AO353_09195 aldehyde dehydrogenase 0.31 8
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_815 Putrescine utilization regulator 0.96 PfGW456L13_805 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (EC 1.2.1.99); 4-guanidinobutyraldehyde dehydrogenase (EC 1.2.1.54) (from data) low > 87
Pseudomonas sp. RS175 0.97 PFR28_04396 HTH-type transcriptional regulator PuuR 0.94 PFR28_04407 NADP/NAD-dependent aldehyde dehydrogenase PuuC low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_0238 Helix-turn-helix motif protein 0.91 Psyr_0227 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_0238 Helix-turn-helix motif protein 0.91 Psyr_0227 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase low > 86
Pseudomonas putida KT2440 0.89 PP_5268 DNA-binding transcriptional repressor PuuR-putrescine 0.88 PP_5278 4-guanidinobutyraldehyde dehydrogenase low > 96
Pseudomonas sp. S08-1 0.83 OH686_13700 Putrescine utilization regulator 0.85 OH686_13645 Aldehyde dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.83 Psest_3791 Predicted transcriptional regulators 0.84 Psest_4305 NAD-dependent aldehyde dehydrogenases low > 67
Shewanella oneidensis MR-1 0.71 SO1265 transcriptional regulator, putative (NCBI ptt file) 0.75 SO3496 aldehyde dehydrogenase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.70 Shew_0970 XRE family transcriptional regulator (RefSeq) 0.73 Shew_0967 aldehyde dehydrogenase (RefSeq) low > 60
Shewanella sp. ANA-3 0.70 Shewana3_3100 XRE family transcriptional regulator (RefSeq) 0.75 Shewana3_3105 aldehyde dehydrogenase (acceptor) (RefSeq) low > 73
Shewanella amazonensis SB2B 0.70 Sama_2646 XRE family transcriptional regulator (RefSeq) 0.75 Sama_2648 aldehyde dehydrogenase (RefSeq) low > 62
Rhodospirillum rubrum S1H 0.53 Rru_A2042 Transcriptional Regulator, XRE family with Cupin sensor domain (NCBI) 0.56 Rru_A0298 Aldehyde dehydrogenase (NAD+) (NCBI) low > 58
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS23170 XRE family transcriptional regulator 0.60 BPHYT_RS23175 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase low > 109
Azospirillum sp. SherDot2 0.48 MPMX19_04921 HTH-type transcriptional regulator PuuR 0.47 MPMX19_03254 NADP/NAD-dependent aldehyde dehydrogenase PuuC low > 112
Agrobacterium fabrum C58 0.47 Atu3328 aldehyde dehydrogenase 0.47 Atu3959 aldehyde dehydrogenase low > 89
Escherichia coli ECOR38 0.37 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR 0.57 HEPCGN_25770 puuC aldehyde dehydrogenase PuuC low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_02383 HTH-type transcriptional regulator PuuR 0.58 OHPLBJKB_02382 NADP/NAD-dependent aldehyde dehydrogenase PuuC low > 73
Escherichia coli ECRC101 0.37 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR 0.57 MCAODC_15840 puuC aldehyde dehydrogenase PuuC low > 87
Enterobacter asburiae PDN3 0.37 EX28DRAFT_1500 Predicted transcriptional regulators 0.56 EX28DRAFT_1501 NAD-dependent aldehyde dehydrogenases low > 76
Escherichia coli ECRC100 0.37 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR 0.57 OKFHMN_02430 puuC aldehyde dehydrogenase PuuC low > 80
Escherichia coli ECRC62 0.37 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR 0.58 BNILDI_18265 puuC aldehyde dehydrogenase PuuC low > 75
Escherichia coli ECRC99 0.37 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR 0.57 KEDOAH_26345 puuC aldehyde dehydrogenase PuuC — —
Serratia liquefaciens MT49 0.37 IAI46_17165 HTH-type transcriptional regulator PuuR 0.61 IAI46_10545 aldehyde dehydrogenase PuuC low > 86
Escherichia coli ECRC98 0.37 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR 0.57 JDDGAC_04975 puuC aldehyde dehydrogenase PuuC low > 86
Escherichia coli BL21 0.37 ECD_01276 repressor for the divergent puu operons, putrescine inducible 0.58 ECD_01277 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; succinate semialdehyde dehydrogenase low > 61
Escherichia coli ECRC102 0.37 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR 0.57 NIAGMN_26600 puuC aldehyde dehydrogenase PuuC — —
Escherichia coli BW25113 0.37 b1299 puuR DNA-binding transcriptional repressor (NCBI) 0.58 b1300 puuC gamma-Glu-gamma-aminobutyraldehyde dehydrogenase, NAD(P)H-dependent (NCBI) 0.34 3
Escherichia coli ECOR27 0.37 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR 0.58 NOLOHH_20115 puuC aldehyde dehydrogenase PuuC low > 75
Klebsiella michiganensis M5al 0.37 BWI76_RS10700 XRE family transcriptional regulator 0.58 BWI76_RS10695 aldehyde dehydrogenase PuuC low > 92
Cupriavidus basilensis FW507-4G11 0.22 RR42_RS00225 XRE family transcriptional regulator 0.57 RR42_RS26255 aldehyde dehydrogenase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_03130 transcriptional regulator, XRE family with cupin sensor 0.49 H281DRAFT_00993 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase low > 103
Phaeobacter inhibens DSM 17395 0.18 PGA1_c28440 putative transcriptional regulator 0.45 PGA1_c32250 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC low > 62
Castellaniella sp019104865 MT123 0.14 ABCV34_RS09100 XRE family transcriptional regulator 0.46 ABCV34_RS06275 aldehyde dehydrogenase low > 48

Not shown: 17 genomes with orthologs for Pf1N1B4_2147 only; 8 genomes with orthologs for Pf1N1B4_2132 only