Conservation of cofitness between Pf1N1B4_3491 and Pf1N1B4_1661 in Pseudomonas fluorescens FW300-N1B4

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_3491 tRNA(Cytosine32)-2-thiocytidine synthetase 1.0 Pf1N1B4_1661 Agmatine deiminase (EC 3.5.3.12) 0.29 4
Pseudomonas fluorescens FW300-N2E3 0.99 AO353_02780 tRNA 2-thiocytidine biosynthesis protein TtcA 0.95 AO353_11915 agmatine deiminase low > 101
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2020 tRNA(Cytosine32)-2-thiocytidine synthetase 0.97 PfGW456L13_397 Agmatine deiminase (EC 3.5.3.12) low > 87
Pseudomonas simiae WCS417 0.97 PS417_16415 tRNA 2-thiocytidine biosynthesis protein TtcA 0.94 PS417_01340 agmatine deiminase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.97 Psyr_3705 conserved hypothetical protein 0.88 Psyr_4932 agmatine deiminase low > 86
Pseudomonas syringae pv. syringae B728a 0.97 Psyr_3705 conserved hypothetical protein 0.88 Psyr_4932 agmatine deiminase low > 86
Pseudomonas fluorescens SBW25-INTG 0.97 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.94 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas fluorescens SBW25 0.97 PFLU_RS18455 tRNA 2-thiocytidine(32) synthetase TtcA 0.94 PFLU_RS01435 agmatine deiminase low > 109
Pseudomonas sp. RS175 0.96 PFR28_03236 tRNA-cytidine(32) 2-sulfurtransferase 0.91 PFR28_04897 Agmatine deiminase low > 88
Pseudomonas fluorescens FW300-N2E2 0.96 Pf6N2E2_5711 tRNA(Cytosine32)-2-thiocytidine synthetase 0.93 Pf6N2E2_3876 Agmatine deiminase (EC 3.5.3.12) 0.26 57
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_19000 tRNA 2-thiocytidine biosynthesis protein TtcA 0.93 AO356_10030 Agmatine deiminase (EC 3.5.3.12) (from data) low > 104
Pseudomonas putida KT2440 0.92 PP_1641 tRNA 2-thiocytidine biosynthesis protein TtcA 0.84 PP_0266 Agmatine deiminase 0.23 14
Pseudomonas stutzeri RCH2 0.89 Psest_3033 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 0.75 Psest_4291 agmatine deiminase low > 67
Pseudomonas sp. S08-1 0.88 OH686_05145 tRNA-(cytosine32)-2-thiocytidine synthetase TtcA 0.82 OH686_11505 agmatine deiminase low > 80
Shewanella amazonensis SB2B 0.72 Sama_1801 hypothetical protein (RefSeq) 0.55 Sama_2521 agmatine deiminase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.72 SO2354 conserved hypothetical protein (NCBI ptt file) 0.54 SO_0887 agmatine deiminase (RefSeq) low > 76
Dyella japonica UNC79MFTsu3.2 0.70 ABZR86_RS16485 tRNA 2-thiocytidine(32) synthetase TtcA 0.26 ABZR86_RS02780 agmatine/peptidylarginine deiminase — —
Dickeya dadantii 3937 0.70 DDA3937_RS12330 tRNA 2-thiocytidine(32) synthetase TtcA 0.52 DDA3937_RS00855 agmatine deiminase low > 74
Dickeya dianthicola 67-19 0.70 HGI48_RS12410 tRNA 2-thiocytidine(32) synthetase TtcA 0.53 HGI48_RS20520 agmatine deiminase low > 71
Dickeya dianthicola ME23 0.70 DZA65_RS12850 tRNA 2-thiocytidine(32) synthetase TtcA 0.53 DZA65_RS21565 agmatine deiminase low > 75
Marinobacter adhaerens HP15 0.70 HP15_2116 PP-loop domain protein 0.22 HP15_2073 peptidyl-arginine deiminase family protein low > 73
Pectobacterium carotovorum WPP14 0.69 HER17_RS09605 tRNA 2-thiocytidine(32) synthetase TtcA 0.54 HER17_RS00785 agmatine deiminase low > 75
Lysobacter sp. OAE881 0.68 ABIE51_RS01305 tRNA 2-thiocytidine(32) synthetase TtcA 0.24 ABIE51_RS09325 agmatine deiminase family protein — —
Rahnella sp. WP5 0.68 EX31_RS06375 tRNA 2-thiocytidine(32) synthetase TtcA 0.52 EX31_RS21180 agmatine deiminase low > 89
Rhodanobacter denitrificans FW104-10B01 0.65 LRK54_RS10680 tRNA 2-thiocytidine(32) synthetase TtcA 0.24 LRK54_RS00335 agmatine deiminase family protein — —
Rhodanobacter denitrificans MT42 0.65 LRK55_RS10320 tRNA 2-thiocytidine(32) synthetase TtcA 0.24 LRK55_RS00025 agmatine deiminase family protein — —
Rhodanobacter sp. FW510-T8 0.64 OKGIIK_13200 ttcA tRNA 2-thiocytidine(32) synthetase TtcA 0.24 OKGIIK_06975 Agmatine deiminase — —
Xanthomonas campestris pv. campestris strain 8004 0.62 Xcc-8004.5211.1 tRNA(Cytosine32)-2-thiocytidine synthetase 0.23 Xcc-8004.2375.1 Agmatine deiminase (EC 3.5.3.12) — —
Bacteroides ovatus ATCC 8483 0.22 BACOVA_05345 PP-loop family protein 0.22 BACOVA_02593 hypothetical protein low > 94
Phocaeicola dorei CL03T12C01 0.22 ABI39_RS18325 adenine nucleotide alpha hydrolase family protein 0.20 ABI39_RS16700 agmatine deiminase family protein low > 72
Bacteroides stercoris CC31F 0.21 HMPREF1181_RS13335 adenine nucleotide alpha hydrolase family protein 0.25 HMPREF1181_RS14245 agmatine deiminase family protein low > 56
Bacteroides thetaiotaomicron VPI-5482 0.21 BT4558 conserved hypothetical protein (NCBI ptt file) 0.20 BT0876 conserved hypothetical protein (NCBI ptt file) low > 81
Parabacteroides merdae CL09T00C40 0.21 HMPREF1078_RS13920 tRNA 2-thiocytidine biosynthesis TtcA family protein 0.24 HMPREF1078_RS01165 agmatine deiminase family protein low > 61

Not shown: 49 genomes with orthologs for Pf1N1B4_3491 only; 6 genomes with orthologs for Pf1N1B4_1661 only