Conservation of cofitness between PP_4701 and PP_5348 in Pseudomonas putida KT2440

26 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4701 glucose-6-phosphate isomerase 1.0 PP_5348 Transcriptional regulator, LysR family 0.21 2
Pseudomonas fluorescens FW300-N2E3 0.91 AO353_14370 glucose-6-phosphate isomerase 0.87 AO353_10035 LysR family transcriptional regulator 0.49 61
Pseudomonas simiae WCS417 0.90 PS417_23920 glucose-6-phosphate isomerase 0.84 PS417_28220 LysR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_2850 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.85 Pf1N1B4_2009 LysR family transcriptional regulator PA5437 0.62 27
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1518 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.84 PfGW456L13_727 LysR family transcriptional regulator PA5437 — —
Pseudomonas fluorescens SBW25 0.90 PFLU_RS25760 glucose-6-phosphate isomerase 0.84 PFLU_RS29885 LysR family transcriptional regulator 0.67 11
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS25760 glucose-6-phosphate isomerase 0.84 PFLU_RS29885 LysR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_5150 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.83 Pf6N2E2_4277 LysR family transcriptional regulator PA5437 0.43 12
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_16050 glucose-6-phosphate isomerase 0.85 AO356_12015 LysR family transcriptional regulator 0.58 9
Pseudomonas sp. RS175 0.90 PFR28_03724 Glucose-6-phosphate isomerase 0.86 PFR28_04519 HTH-type transcriptional activator CmpR low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_0826 glucose-6-phosphate isomerase 0.80 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_0826 glucose-6-phosphate isomerase 0.80 Psyr_5062 transcriptional regulator, LysR family low > 86
Pseudomonas sp. S08-1 0.84 OH686_17230 Glucose-6-phosphate isomerase 0.71 OH686_13195 Transcriptional regulator, LysR family — —
Pseudomonas stutzeri RCH2 0.78 Psest_0993 Glucose-6-phosphate isomerase 0.74 Psest_4086 Transcriptional regulator low > 67
Shewanella sp. ANA-3 0.56 Shewana3_3148 pgi glucose-6-phosphate isomerase (RefSeq) 0.22 Shewana3_0835 LysR family transcriptional regulator (RefSeq) — —
Shewanella oneidensis MR-1 0.55 SO3547 pgi glucose-6-phosphate isomerase (NCBI ptt file) 0.23 SO3757 rbcR rubisco operon transcriptional regulator (NCBI ptt file) — —
Shewanella amazonensis SB2B 0.55 Sama_0912 pgi glucose-6-phosphate isomerase (RefSeq) 0.24 Sama_0693 RuBisCo operon transcriptional regulator (RefSeq) — —
Shewanella loihica PV-4 0.54 Shew_1088 pgi glucose-6-phosphate isomerase (RefSeq) 0.33 Shew_1245 LysR family transcriptional regulator (RefSeq) — —
Rhodospirillum rubrum S1H 0.47 Rru_A2947 Glucose-6-phosphate isomerase (NCBI) 0.33 Rru_A2401 RuBisCO transcriptional regulator cbbR, LysR family (NCBI) — —
Dechlorosoma suillum PS 0.46 Dsui_1239 glucose-6-phosphate isomerase 0.30 Dsui_2869 transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS09060 glucose-6-phosphate isomerase 0.33 RR42_RS31340 transcriptional regulator low > 128
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS09500 glucose-6-phosphate isomerase 0.34 BPHYT_RS29890 LysR family transcriptional regulator low > 109
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS21935 glucose-6-phosphate isomerase 0.33 QEN71_RS20425 LysR family transcriptional regulator low > 153
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00906 glucose-6-phosphate isomerase 0.35 H281DRAFT_03013 transcriptional regulator, LysR family — —
Sinorhizobium meliloti 1021 0.42 SMc02163 glucose-6-phosphate isomerase 0.25 SM_b20203 transcriptional regulator — —
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2077 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.31 Ac3H11_3174 RuBisCO operon transcriptional regulator — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF5497 Glucose-6-phosphate isomerase (EC 5.3.1.9) 0.32 GFF2192 Cys regulon transcriptional activator CysB low > 90

Not shown: 42 genomes with orthologs for PP_4701 only; 5 genomes with orthologs for PP_5348 only