Conservation of cofitness between PP_2137 and PP_4549 in Pseudomonas putida KT2440

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2137 beta-ketoadipyl CoA thiolase, beta component 1.0 PP_4549 long-chain-fatty-acid/CoA ligase 0.58 3
Pseudomonas sp. RS175 0.96 PFR28_01111 3-ketoacyl-CoA thiolase 0.90 PFR28_00585 Long-chain-fatty-acid--CoA ligase 0.60 2
Pseudomonas syringae pv. syringae B728a 0.95 Psyr_3289 3-ketoacyl-CoA thiolase 0.89 Psyr_3834 AMP-dependent synthetase and ligase low > 86
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_4040 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.90 PfGW456L13_1911 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.59 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.95 Psyr_3289 3-ketoacyl-CoA thiolase 0.89 Psyr_3834 AMP-dependent synthetase and ligase low > 86
Pseudomonas fluorescens FW300-N2E3 0.95 AO353_00505 3-ketoacyl-CoA thiolase 0.91 AO353_03310 long-chain fatty acid--CoA ligase low > 101
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_02325 3-ketoacyl-CoA thiolase 0.90 AO356_05100 long-chain fatty acid--CoA ligase 0.27 19
Pseudomonas fluorescens SBW25 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA 0.90 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.94 2
Pseudomonas fluorescens SBW25-INTG 0.95 PFLU_RS07655 acetyl-CoA C-acyltransferase FadA 0.90 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.69 3
Pseudomonas simiae WCS417 0.94 PS417_07580 3-ketoacyl-CoA thiolase 0.90 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) — —
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_2289 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.91 Pf6N2E2_2872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Pseudomonas sp. S08-1 0.93 OH686_21930 acetyl-CoA C-acyltransferase FadA 0.86 OH686_05750 Long-chain-fatty-acid--CoA ligase 0.78 7
Pseudomonas stutzeri RCH2 0.90 Psest_2653 fatty oxidation complex, beta subunit FadA 0.84 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) — —
Marinobacter adhaerens HP15 0.72 HP15_1513 Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.63 HP15_1864 acyl-CoA synthase low > 73
Kangiella aquimarina DSM 16071 0.67 B158DRAFT_0355 fatty oxidation complex, beta subunit FadA 0.51 B158DRAFT_1573 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 40
Alteromonas macleodii MIT1002 0.66 MIT1002_00574 3-ketoacyl-CoA thiolase 0.50 MIT1002_02588 Long-chain-fatty-acid--CoA ligase low > 70
Shewanella sp. ANA-3 0.65 Shewana3_0023 fadA Acetyl-CoA C-acyltransferase (EC 2.3.1.16) (from data) 0.52 Shewana3_2386 long-chain-fatty-acid--CoA ligase (RefSeq) 0.70 2
Shewanella oneidensis MR-1 0.65 SO0020 fadA fatty oxidation complex, beta subunit (NCBI ptt file) 0.51 SO2581 fadD-1 long-chain-fatty-acid--CoA ligase (NCBI ptt file) 0.56 10
Serratia liquefaciens MT49 0.65 IAI46_01125 acetyl-CoA C-acyltransferase FadA 0.55 IAI46_14535 long-chain-fatty-acid--CoA ligase FadD low > 86
Pantoea sp. MT58 0.65 IAI47_18235 acetyl-CoA C-acyltransferase FadA 0.55 IAI47_08835 long-chain-fatty-acid--CoA ligase FadD low > 76
Enterobacter asburiae PDN3 0.64 EX28DRAFT_4509 fatty oxidation complex, beta subunit FadA 0.55 EX28DRAFT_0753 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 76
Acinetobacter radioresistens SK82 0.64 MPMX26_00225 3-ketoacyl-CoA thiolase 0.47 MPMX26_00141 Long-chain-fatty-acid--CoA ligase 0.80 1
Pectobacterium carotovorum WPP14 0.64 HER17_RS20555 acetyl-CoA C-acyltransferase FadA 0.53 HER17_RS11275 long-chain-fatty-acid--CoA ligase FadD low > 75
Enterobacter sp. TBS_079 0.64 MPMX20_04437 3-ketoacyl-CoA thiolase 0.55 MPMX20_02711 Long-chain-fatty-acid--CoA ligase 0.34 4
Escherichia coli Nissle 1917 0.64 ECOLIN_RS22165 acetyl-CoA C-acyltransferase FadA 0.55 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD — —
Rahnella sp. WP5 0.64 EX31_RS14570 acetyl-CoA C-acyltransferase FadA 0.54 EX31_RS10600 long-chain-fatty-acid--CoA ligase FadD low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.64 GFF272 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.55 GFF2820 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 78
Escherichia coli ECRC101 0.63 MCAODC_04755 fadA acetyl-CoA C-acyltransferase FadA 0.55 MCAODC_18815 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC101 0.63 OKFHMN_14250 fadA acetyl-CoA C-acyltransferase FadA 0.55 OKFHMN_26595 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC102 0.63 NIAGMN_12005 fadA acetyl-CoA C-acyltransferase FadA 0.55 NIAGMN_01470 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC98 0.63 JDDGAC_17875 fadA acetyl-CoA C-acyltransferase FadA 0.55 JDDGAC_01170 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC99 0.63 KEDOAH_13900 fadA acetyl-CoA C-acyltransferase FadA 0.55 KEDOAH_01515 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC62 0.63 BNILDI_05150 fadA acetyl-CoA C-acyltransferase FadA 0.55 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_04208 3-ketoacyl-CoA thiolase FadA 0.55 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase low > 73
Escherichia coli BL21 0.63 ECD_03736 3-ketoacyl-CoA thiolase (thiolase I) 0.55 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) low > 60
Klebsiella michiganensis M5al 0.63 BWI76_RS01360 acetyl-CoA C-acyltransferase FadA 0.56 BWI76_RS17800 long-chain-fatty-acid--CoA ligase low > 92
Escherichia fergusonii Becca 0.63 EFB2_04772 3-ketoacyl-CoA thiolase FadA 0.55 EFB2_02195 Long-chain-fatty-acid--CoA ligase low > 86
Escherichia coli ECOR38 0.63 HEPCGN_12880 fadA acetyl-CoA C-acyltransferase FadA 0.55 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD low > 85
Escherichia coli BW25113 0.63 b3845 fadA acetyl-CoA acetyltransferase (NCBI) 0.55 b1805 fadD acyl-CoA synthase (NCBI) 0.17 44
Escherichia coli ECOR27 0.63 NOLOHH_06380 fadA acetyl-CoA C-acyltransferase FadA 0.55 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD — —
Vibrio cholerae E7946 ATCC 55056 0.62 CSW01_13975 acetyl-CoA C-acyltransferase FadA 0.53 CSW01_09905 long-chain-fatty-acid--CoA ligase FadD low > 62
Dickeya dianthicola 67-19 0.60 HGI48_RS00970 acetyl-CoA C-acyltransferase FadA 0.53 HGI48_RS11260 long-chain-fatty-acid--CoA ligase FadD low > 71
Azospirillum brasilense Sp245 0.39 AZOBR_RS20220 acetyl-CoA acetyltransferase 0.30 AZOBR_RS31155 AMP-dependent synthetase low > 97
Variovorax sp. SCN45 0.38 GFF2768 3-ketoacyl-CoA thiolase 2 [fadN-fadA-fadE operon] (EC 2.3.1.16) 0.50 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 127
Variovorax sp. OAS795 0.38 ABID97_RS20240 thiolase family protein 0.50 ABID97_RS04445 long-chain-fatty-acid--CoA ligase low > 91
Xanthomonas campestris pv. campestris strain 8004 0.37 Xcc-8004.2741.1 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) 0.55 Xcc-8004.2896.1 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 74
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS02515 acetyl-CoA acetyltransferase 0.51 RR42_RS18150 long-chain fatty acid--CoA ligase — —

Not shown: 6 genomes with orthologs for PP_2137 only; 25 genomes with orthologs for PP_4549 only