Conservation of cofitness between PP_0356 and PP_4549 in Pseudomonas putida KT2440

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0356 malate synthase G 1.0 PP_4549 long-chain-fatty-acid/CoA ligase 0.53 7
Pseudomonas sp. S08-1 0.88 OH686_10405 malate synthase G 0.86 OH686_05750 Long-chain-fatty-acid--CoA ligase low > 80
Pseudomonas fluorescens FW300-N2E3 0.86 AO353_07560 malate synthase G 0.91 AO353_03310 long-chain fatty acid--CoA ligase low > 101
Pseudomonas fluorescens GW456-L13 0.86 PfGW456L13_1139 Malate synthase G (EC 2.3.3.9) 0.90 PfGW456L13_1911 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.44 33
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_4752 Malate synthase G (EC 2.3.3.9) 0.91 Pf6N2E2_2872 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.25 88
Pseudomonas fluorescens FW300-N2C3 0.86 AO356_14100 malate synthase G 0.90 AO356_05100 long-chain fatty acid--CoA ligase low > 104
Pseudomonas sp. RS175 0.86 PFR28_04110 Malate synthase G 0.90 PFR28_00585 Long-chain-fatty-acid--CoA ligase low > 88
Pseudomonas simiae WCS417 0.86 PS417_26040 malate synthase 0.90 PS417_22065 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) low > 88
Pseudomonas fluorescens SBW25-INTG 0.85 PFLU_RS27685 malate synthase G 0.90 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.34 45
Pseudomonas fluorescens SBW25 0.85 PFLU_RS27685 malate synthase G 0.90 PFLU_RS23680 long-chain fatty acid--CoA ligase 0.60 47
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_4700 malate synthase 0.89 Psyr_3834 AMP-dependent synthetase and ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_4700 malate synthase 0.89 Psyr_3834 AMP-dependent synthetase and ligase low > 86
Pseudomonas stutzeri RCH2 0.84 Psest_0354 Malate synthase G (EC 2.3.3.9) (from data) 0.84 Psest_1335 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) low > 67
Marinobacter adhaerens HP15 0.70 HP15_2188 malate synthase G 0.63 HP15_1864 acyl-CoA synthase low > 73
Paraburkholderia sabiae LMG 24235 0.69 QEN71_RS31820 malate synthase G 0.51 QEN71_RS22975 AMP-binding protein low > 153
Sinorhizobium meliloti 1021 0.69 SMc02581 malate synthase G 0.48 SMc02162 long-chain-fatty-acid--CoA ligase 0.42 47
Rhizobium sp. OAE497 0.69 ABIE40_RS19490 malate synthase G 0.49 ABIE40_RS02155 long-chain fatty acid--CoA ligase 0.56 5
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS09815 malate synthase 0.51 BPHYT_RS08270 long-chain fatty acid--CoA ligase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.67 H281DRAFT_00963 malate synthase 0.51 H281DRAFT_05129 long-chain acyl-CoA synthetase low > 103
Acidovorax sp. GW101-3H11 0.66 Ac3H11_4835 Malate synthase G (EC 2.3.3.9) 0.50 Ac3H11_663 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) — —
Paraburkholderia graminis OAS925 0.66 ABIE53_002201 malate synthase 0.52 ABIE53_002420 long-chain acyl-CoA synthetase low > 113
Variovorax sp. SCN45 0.66 GFF6305 Malate synthase G (EC 2.3.3.9) 0.50 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 127
Castellaniella sp019104865 MT123 0.65 ABCV34_RS12110 malate synthase G 0.47 ABCV34_RS11410 AMP-binding protein low > 48
Variovorax sp. OAS795 0.65 ABID97_RS04710 malate synthase G 0.50 ABID97_RS04445 long-chain-fatty-acid--CoA ligase 0.49 9
Rhodopseudomonas palustris CGA009 0.65 TX73_021855 malate synthase G 0.49 TX73_022105 long-chain fatty acid--CoA ligase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.63 GFF3040 Malate synthase G (EC 2.3.3.9) 0.51 GFF2607 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) 0.57 66
Desulfovibrio vulgaris Miyazaki F 0.63 DvMF_2183 malate synthase G (RefSeq) 0.30 DvMF_0256 AMP-dependent synthetase and ligase (RefSeq) low > 51
Acinetobacter radioresistens SK82 0.63 MPMX26_01247 Malate synthase G 0.47 MPMX26_00141 Long-chain-fatty-acid--CoA ligase low > 36
Dinoroseobacter shibae DFL-12 0.61 Dshi_1227 malate synthase G (RefSeq) 0.41 Dshi_1000 AMP-dependent synthetase and ligase (RefSeq) low > 64
Alteromonas macleodii MIT1002 0.61 MIT1002_02833 Malate synthase G 0.50 MIT1002_02588 Long-chain-fatty-acid--CoA ligase low > 70
Desulfovibrio vulgaris Hildenborough JW710 0.60 DVU0701 glcB malate synthase G (TIGR) 0.29 DVU1453 fadD long-chain-fatty-acid--CoA ligase (TIGR) low > 55
Escherichia coli BL21 0.60 ECD_02844 malate synthase G 0.55 ECD_01775 acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase) low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.60 OHPLBJKB_00731 Malate synthase G 0.55 OHPLBJKB_01928 Long-chain-fatty-acid--CoA ligase low > 73
Escherichia coli BW25113 0.60 b2976 glcB malate synthase (NCBI) 0.55 b1805 fadD acyl-CoA synthase (NCBI) low > 76
Escherichia coli ECOR38 0.60 HEPCGN_18015 glcB malate synthase G 0.55 HEPCGN_04985 fadD long-chain-fatty-acid--CoA ligase FadD low > 85
Escherichia coli ECOR27 0.60 NOLOHH_10940 glcB malate synthase G 0.55 NOLOHH_17115 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli Nissle 1917 0.59 ECOLIN_RS17120 malate synthase G 0.55 ECOLIN_RS10040 long-chain-fatty-acid--CoA ligase FadD — —
Escherichia coli ECRC62 0.59 BNILDI_00575 glcB malate synthase G 0.55 BNILDI_15900 fadD long-chain-fatty-acid--CoA ligase FadD — —
Escherichia fergusonii Becca 0.59 EFB2_00839 Malate synthase G 0.55 EFB2_02195 Long-chain-fatty-acid--CoA ligase low > 86

Not shown: 7 genomes with orthologs for PP_0356 only; 33 genomes with orthologs for PP_4549 only