Conservation of cofitness between PP_0850 and PP_4184 in Pseudomonas putida KT2440

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0850 Dual-specificity RNA methyltransferase RlmN 1.0 PP_4184 branched chain amino acid transporter 0.30 15
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_06605 23S rRNA (adenine(2503)-C2)-methyltransferase 0.84 AO356_19720 branched-chain amino acid ABC transporter substrate-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_3181 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.84 Pf6N2E2_5860 Branched-chain amino acid transport system carrier protein — —
Pseudomonas sp. RS175 0.88 PFR28_00294 Dual-specificity RNA methyltransferase RlmN 0.84 PFR28_03091 Branched-chain amino acid transport system 2 carrier protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.87 AO353_15875 23S rRNA (adenine(2503)-C2)-methyltransferase 0.83 AO353_01810 branched-chain amino acid ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens GW456-L13 0.87 PfGW456L13_4865 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.85 PfGW456L13_4264 Branched-chain amino acid transport system carrier protein 0.32 39
Pseudomonas fluorescens SBW25 0.87 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.80 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.87 PFLU_RS24815 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.80 PFLU_RS08980 branched-chain amino acid transport system II carrier protein low > 109
Pseudomonas simiae WCS417 0.87 PS417_23160 50S rRNA methyltransferase 0.78 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein low > 88
Pseudomonas fluorescens FW300-N1B4 0.87 Pf1N1B4_857 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.82 Pf1N1B4_3686 Branched-chain amino acid transport system carrier protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.86 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.82 Psyr_2015 Branched-chain amino acid transport system II carrier protein 0.35 64
Pseudomonas syringae pv. syringae B728a 0.86 Psyr_1245 23S rRNA m(2)A-2503 methyltransferase 0.82 Psyr_2015 Branched-chain amino acid transport system II carrier protein low > 86
Pseudomonas sp. S08-1 0.85 OH686_17515 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.79 OH686_01945 branched-chain amino acid transport system II carrier protein low > 80
Pseudomonas stutzeri RCH2 0.84 Psest_1259 23S rRNA m2A2503 methyltransferase 0.55 Psest_2489 branched-chain amino acid uptake carrier low > 67
Acinetobacter radioresistens SK82 0.60 MPMX26_00426 Dual-specificity RNA methyltransferase RlmN 0.57 MPMX26_01263 Branched-chain amino acid transport system 2 carrier protein low > 36
Escherichia coli ECRC102 0.56 NIAGMN_19480 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 NIAGMN_06590 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli BL21 0.56 ECD_02409 dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent 0.69 ECD_00349 branched-chain amino acid transport system 2 carrier protein; LIV-II transport system for Ile, Leu, and Val low > 60
Escherichia coli ECOR27 0.56 NOLOHH_13360 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 NOLOHH_01465 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 57
Escherichia fergusonii Becca 0.56 EFB2_01373 Dual-specificity RNA methyltransferase RlmN 0.69 EFB2_03656 Branched-chain amino acid transport system 2 carrier protein low > 86
Escherichia coli ECRC98 0.56 JDDGAC_25385 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 JDDGAC_12190 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC99 0.56 KEDOAH_06510 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 KEDOAH_19430 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECOR38 0.56 HEPCGN_20830 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 HEPCGN_07175 brnQ branched-chain amino acid transporter carrier protein BrnQ low > 85
Escherichia coli BW25113 0.56 b2517 yfgB predicted enzyme (NCBI) 0.69 b0401 brnQ predicted branched chain amino acid transporter (LIV-II) (NCBI) low > 76
Escherichia coli ECRC62 0.56 BNILDI_12160 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 BNILDI_22880 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC101 0.56 OKFHMN_21710 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 OKFHMN_08535 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli ECRC101 0.56 MCAODC_12240 rlmN bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 MCAODC_27760 brnQ branched-chain amino acid transporter carrier protein BrnQ — —
Escherichia coli Nissle 1917 0.56 ECOLIN_RS14300 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 ECOLIN_RS02420 branched-chain amino acid transporter carrier protein BrnQ low > 52
Escherichia coli HS(pFamp)R (ATCC 700891) 0.55 OHPLBJKB_01192 Dual-specificity RNA methyltransferase RlmN 0.69 OHPLBJKB_03275 Branched-chain amino acid transport system 2 carrier protein low > 73
Enterobacter asburiae PDN3 0.55 EX28DRAFT_0126 23S rRNA (adenine(2503)-C(2))-methyltransferase 0.70 EX28DRAFT_2573 branched-chain amino acid uptake carrier low > 76
Enterobacter sp. TBS_079 0.55 MPMX20_03395 Dual-specificity RNA methyltransferase RlmN 0.69 MPMX20_00988 Branched-chain amino acid transport system 2 carrier protein 0.19 73
Dickeya dadantii 3937 0.55 DDA3937_RS15480 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.67 DDA3937_RS05445 branched-chain amino acid transport system II carrier protein low > 74
Klebsiella michiganensis M5al 0.55 BWI76_RS21095 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.67 BWI76_RS06240 branched-chain amino acid transport system 2 carrier protein BrnQ low > 92
Pectobacterium carotovorum WPP14 0.55 HER17_RS06085 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.68 HER17_RS16020 branched-chain amino acid transport system II carrier protein 0.59 42
Serratia liquefaciens MT49 0.54 IAI46_19290 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.68 IAI46_04795 branched-chain amino acid transport system II carrier protein low > 86
Shewanella oneidensis MR-1 0.54 SO3315 conserved hypothetical protein TIGR00048 (NCBI ptt file) 0.36 SO0949 brnQ branched-chain amino acid transport system II carrier protein BrnQ (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.54 Shewana3_1226 hypothetical protein (RefSeq) 0.36 Shewana3_3332 branched-chain amino acid transport system II carrier protein (RefSeq) low > 73
Dickeya dianthicola 67-19 0.54 HGI48_RS15590 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.67 HGI48_RS05505 branched-chain amino acid transport system II carrier protein low > 71
Erwinia tracheiphila SCR3 0.54 LU632_RS17815 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.69 LU632_RS18890 brnQ branched-chain amino acid transport system II carrier protein low > 74
Dickeya dianthicola ME23 0.54 DZA65_RS16665 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.67 DZA65_RS05830 branched-chain amino acid transport system II carrier protein low > 75
Rahnella sp. WP5 0.54 EX31_RS20525 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.66 EX31_RS22065 branched-chain amino acid transport system II carrier protein low > 89
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2414 Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) 0.69 GFF4299 Branched-chain amino acid transport system carrier protein low > 78
Shewanella amazonensis SB2B 0.53 Sama_2368 hypothetical protein (RefSeq) 0.37 Sama_2740 branched-chain amino acid transport system II carrier protein BrnQ (RefSeq) low > 62
Shewanella loihica PV-4 0.53 Shew_1287 hypothetical protein (RefSeq) 0.39 Shew_0769 branched-chain amino acid transport system II carrier protein (RefSeq) low > 60
Pantoea sp. MT58 0.53 IAI47_05040 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.68 IAI47_14835 branched-chain amino acid transporter carrier protein BrnQ low > 76
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_03930 bifunctional tRNA (adenosine(37)-C2)-methyltransferase TrmG/ribosomal RNA large subunit methyltransferase RlmN 0.37 CSW01_03485 branched-chain amino acid transport system II carrier protein low > 62
Fusobacterium nucleatum SB010 0.29 HUW76_07445 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.24 HUW76_00240 branched-chain amino acid transport system II carrier protein low > 35
Bifidobacterium breve UCC2003 0.27 BBR_RS16105 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN 0.28 BBR_RS15570 branched-chain amino acid transport system II carrier protein low > 34

Not shown: 53 genomes with orthologs for PP_0850 only; 0 genomes with orthologs for PP_4184 only