Conservation of cofitness between PP_0961 and PP_2148 in Pseudomonas putida KT2440

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0961 toluene tolerance protein 1.0 PP_2148 transcription-repair coupling factor 0.38 19
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_5005 Uncharacterized ABC transporter, auxiliary component YrbC 0.87 PfGW456L13_4027 Transcription-repair coupling factor low > 87
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_1071 Uncharacterized ABC transporter, auxiliary component YrbC 0.87 Pf1N1B4_3916 Transcription-repair coupling factor — —
Pseudomonas syringae pv. syringae B728a 0.75 Psyr_4138 Toluene tolerance 0.87 Psyr_1896 transcription-repair coupling factor low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.75 Psyr_4138 Toluene tolerance 0.87 Psyr_1896 transcription-repair coupling factor 0.32 81
Pseudomonas sp. RS175 0.74 PFR28_00182 Intermembrane phospholipid transport system binding protein MlaC 0.89 PFR28_01123 Transcription-repair-coupling factor low > 88
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_06990 toluene tolerance protein 0.89 AO356_02270 transcription-repair coupling factor 0.37 39
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_05135 toluene tolerance protein 0.89 AO353_00435 transcription-repair coupling factor low > 101
Pseudomonas stutzeri RCH2 0.71 Psest_3304 ABC-type transport system involved in resistance to organic solvents, auxiliary component 0.85 Psest_1653 transcription-repair coupling factor (mfd) low > 67
Pseudomonas simiae WCS417 0.71 PS417_04390 toluene tolerance protein 0.87 PS417_07635 transcription-repair coupling factor low > 88
Pseudomonas fluorescens SBW25 0.69 PFLU_RS04445 ABC transporter substrate-binding protein 0.87 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas fluorescens SBW25-INTG 0.69 PFLU_RS04445 ABC transporter substrate-binding protein 0.87 PFLU_RS07710 transcription-repair coupling factor low > 109
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_3257 Uncharacterized ABC transporter, auxiliary component YrbC 0.89 Pf6N2E2_2278 Transcription-repair coupling factor low > 103
Pseudomonas sp. S08-1 0.66 OH686_08495 Phospholipid ABC transporter shuttle protein MlaC 0.84 OH686_21990 transcription-repair coupling factor low > 80
Marinobacter adhaerens HP15 0.26 HP15_2433 toluene tolerance family protein 0.62 HP15_2257 transcription-repair-coupling factor low > 73
Acinetobacter radioresistens SK82 0.26 MPMX26_02738 Intermembrane phospholipid transport system binding protein MlaC 0.52 MPMX26_01319 Transcription-repair-coupling factor low > 36
Rhodanobacter sp. FW510-T8 0.17 OKGIIK_12120 Toluene tolerance protein 0.54 OKGIIK_09105 mfd transcription-repair coupling factor low > 52
Rahnella sp. WP5 0.16 EX31_RS12450 phospholipid-binding protein MlaC 0.55 EX31_RS24520 transcription-repair coupling factor low > 89
Lysobacter sp. OAE881 0.15 ABIE51_RS01000 ABC transporter substrate-binding protein 0.54 ABIE51_RS14320 transcription-repair coupling factor low > 62
Hydrogenophaga sp. GW460-11-11-14-LB1 0.15 GFF1321 Uncharacterized ABC transporter, auxiliary component YrbC 0.49 GFF4934 Transcription-repair coupling factor low > 90
Kangiella aquimarina DSM 16071 0.15 B158DRAFT_1389 ABC-type transport system involved in resistance to organic solvents, auxiliary component 0.54 B158DRAFT_1800 transcription-repair coupling factor low > 40
Dickeya dianthicola ME23 0.15 DZA65_RS01560 phospholipid-binding protein MlaC 0.55 DZA65_RS13530 transcription-repair coupling factor 0.58 33
Shewanella loihica PV-4 0.15 Shew_3301 toluene tolerance family protein (RefSeq) 0.55 Shew_1630 transcription-repair coupling factor (RefSeq) low > 60
Dechlorosoma suillum PS 0.15 Dsui_1402 ABC-type transport system involved in resistance to organic solvents, auxiliary component 0.48 Dsui_2385 transcription-repair coupling factor Mfd low > 51
Variovorax sp. SCN45 0.15 GFF5338 Phospholipid ABC transporter shuttle protein MlaC 0.49 GFF412 Transcription-repair coupling factor low > 127
Serratia liquefaciens MT49 0.14 IAI46_22415 phospholipid-binding protein MlaC 0.56 IAI46_10320 transcription-repair coupling factor low > 86
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS32240 ABC transporter 0.48 RR42_RS07845 transcription-repair coupling factor low > 128
Dickeya dianthicola 67-19 0.14 HGI48_RS01495 phospholipid-binding protein MlaC 0.55 HGI48_RS13065 transcription-repair coupling factor low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS01580 phospholipid-binding protein MlaC 0.55 DDA3937_RS13000 transcription-repair coupling factor low > 74
Pantoea sp. MT58 0.13 IAI47_17130 phospholipid-binding protein MlaC 0.55 IAI47_11975 transcription-repair coupling factor low > 76
Klebsiella michiganensis M5al 0.13 BWI76_RS25215 phospholipid-binding protein MlaC 0.55 BWI76_RS11205 transcription-repair coupling factor low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.12 GFF2936 Uncharacterized ABC transporter, auxiliary component YrbC 0.55 GFF3397 Transcription-repair coupling factor low > 78
Enterobacter sp. TBS_079 0.12 MPMX20_04098 Intermembrane phospholipid transport system binding protein MlaC 0.54 MPMX20_01795 Transcription-repair-coupling factor low > 85
Castellaniella sp019104865 MT123 0.12 ABCV34_RS11200 ABC transporter substrate-binding protein 0.47 ABCV34_RS08660 transcription-repair coupling factor — —
Enterobacter asburiae PDN3 0.12 EX28DRAFT_3246 ABC-type transport system involved in resistance to organic solvents, auxiliary component 0.54 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Erwinia tracheiphila SCR3 0.12 LU632_RS21230 mlaC phospholipid-binding protein MlaC 0.54 LU632_RS14730 mfd transcription-repair coupling factor low > 74
Desulfovibrio vulgaris Hildenborough JW710 0.12 DVU1243 conserved hypothetical protein (TIGR) 0.27 DVU1903 mfd transcription-repair coupling factor (TIGR) low > 55

Not shown: 0 genomes with orthologs for PP_0961 only; 51 genomes with orthologs for PP_2148 only