Conservation of cofitness between PP_2375 and PP_1681 in Pseudomonas putida KT2440

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2375 cobalamin-dependent methionine synthase 1.0 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.72 2
Pseudomonas sp. S08-1 0.90 OH686_03335 methionine synthase 0.40 OH686_04945 cobalamin 5'-phosphate synthase low > 80
Pseudomonas stutzeri RCH2 0.89 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase 0.39 Psest_3004 cobalamin 5'-phosphate synthase/cobalamin synthase low > 67
Pseudomonas fluorescens SBW25-INTG 0.88 PFLU_RS13000 methionine synthase 0.56 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.59 18
Pseudomonas fluorescens SBW25 0.88 PFLU_RS13000 methionine synthase 0.56 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.66 54
Pseudomonas fluorescens FW300-N2C3 0.88 AO356_00545 methionine synthase 0.53 AO356_19180 cobalamin synthase 0.67 4
Pseudomonas sp. RS175 0.88 PFR28_01369 Methionine synthase 0.67 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.57 7
Pseudomonas simiae WCS417 0.88 PS417_12310 methionine synthase 0.58 PS417_20020 cobalamin synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.88 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.55 Pf6N2E2_5746 Cobalamin synthase 0.48 46
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_21615 methionine synthase 0.58 AO353_02595 cobalamin synthase 0.46 45
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.59 PfGW456L13_4234 Cobalamin synthase 0.63 9
Pseudomonas fluorescens FW300-N1B4 0.88 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.52 Pf1N1B4_3715 Cobalamin synthase low > 87
Pseudomonas syringae pv. syringae B728a 0.87 Psyr_2464 methionine synthase (B12-dependent) 0.57 Psyr_3672 cobalamin-5'-phosphate synthase 0.64 3
Pseudomonas syringae pv. syringae B728a ΔmexB 0.87 Psyr_2464 methionine synthase (B12-dependent) 0.57 Psyr_3672 cobalamin-5'-phosphate synthase 0.49 55
Acinetobacter radioresistens SK82 0.68 MPMX26_02351 Methionine synthase 0.37 MPMX26_01610 Adenosylcobinamide-GDP ribazoletransferase — —
Rahnella sp. WP5 0.66 EX31_RS11760 methionine synthase 0.21 EX31_RS09930 adenosylcobinamide-GDP ribazoletransferase low > 89
Klebsiella michiganensis M5al 0.65 BWI76_RS01685 methionine synthase 0.16 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC101 0.65 OKFHMN_13240 metH methionine synthase 0.19 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC99 0.65 KEDOAH_14920 metH methionine synthase 0.19 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC102 0.65 NIAGMN_10990 metH methionine synthase 0.19 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECRC101 0.65 MCAODC_03740 metH methionine synthase 0.19 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli ECOR38 0.65 HEPCGN_11885 metH methionine synthase 0.18 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase low > 85
Escherichia coli ECRC98 0.65 JDDGAC_16865 metH methionine synthase 0.19 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase — —
Vibrio cholerae E7946 ATCC 55056 0.65 CSW01_02060 methionine synthase 0.17 CSW01_06265 adenosylcobinamide-GDP ribazoletransferase low > 62
Escherichia coli BL21 0.65 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent 0.19 ECD_01901 cobalamin synthase low > 60
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_04030 Methionine synthase 0.18 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase low > 73
Escherichia coli ECOR27 0.65 NOLOHH_05380 metH methionine synthase 0.18 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase low > 57
Escherichia coli ECRC62 0.65 BNILDI_06140 metH methionine synthase 0.19 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase — —
Escherichia coli BW25113 0.65 b4019 metH B12-dependent methionine synthase (NCBI) 0.19 b1992 cobS cobalamin synthase (NCBI) low > 76
Escherichia coli Nissle 1917 0.65 ECOLIN_RS23160 methionine synthase 0.18 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase low > 52
Escherichia fergusonii Becca 0.65 EFB2_04592 Methionine synthase 0.18 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase low > 86
Dechlorosoma suillum PS 0.64 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase 0.15 Dsui_0471 cobalamin 5''-phosphate synthase/cobalamin synthase — —
Shewanella amazonensis SB2B 0.63 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.18 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) low > 62
Shewanella oneidensis MR-1 0.62 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) 0.16 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.62 Shew_0710 metH B12-dependent methionine synthase (RefSeq) 0.16 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.62 HSERO_RS21740 methionine synthase 0.14 HSERO_RS09775 cobalamin synthase 0.69 13
Agrobacterium fabrum C58 0.61 Atu2155 methionine synthase 0.15 Atu1891 cobalamin biosynthesis protein low > 89
Sinorhizobium meliloti 1021 0.60 SMc03112 B12-dependent methionine synthase 0.16 SMc04215 cobalamin synthase — —
Fusobacterium nucleatum SB010 0.29 HUW76_02290 homocysteine S-methyltransferase family protein 0.20 HUW76_05620 adenosylcobinamide-GDP ribazoletransferase low > 35
Magnetospirillum magneticum AMB-1 0.22 AMB_RS02225 methionine synthase 0.11 AMB_RS02800 adenosylcobinamide-GDP ribazoletransferase — —
Rhodospirillum rubrum S1H 0.20 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) 0.11 Rru_A0668 Cobalamin-5-phosphate synthase CobS (NCBI) — —

Not shown: 22 genomes with orthologs for PP_2375 only; 16 genomes with orthologs for PP_1681 only