Conservation of cofitness between PP_1598 and PP_1238 in Pseudomonas putida KT2440

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1598 regulatory intramembrane protein RIP zinc protease 1.0 PP_1238 putative Lipoprotein 0.34 12
Pseudomonas fluorescens SBW25 0.83 PFLU_RS06310 sigma E protease regulator RseP 0.75 PFLU_RS07280 outer membrane protein assembly factor BamC low > 109
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS06310 sigma E protease regulator RseP 0.75 PFLU_RS07280 outer membrane protein assembly factor BamC low > 109
Pseudomonas simiae WCS417 0.83 PS417_06245 zinc metallopeptidase RseP 0.75 PS417_07170 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_16495 zinc metallopeptidase RseP 0.78 AO353_17675 hypothetical protein low > 101
Pseudomonas sp. RS175 0.82 PFR28_00403 Regulator of sigma-E protease RseP 0.78 PFR28_00700 Outer membrane protein assembly factor BamC low > 88
Pseudomonas fluorescens FW300-N2C3 0.82 AO356_06005 zinc metallopeptidase RseP 0.78 AO356_04525 hypothetical protein low > 104
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_4701 Membrane-associated zinc metalloprotease 0.77 PfGW456L13_4506 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor low > 87
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3062 Membrane-associated zinc metalloprotease 0.77 Pf6N2E2_2746 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B 0.78 Psyr_1549 lipoprotein, putative low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_1350 site-2 protease, Metallo peptidase, MEROPS family M50B 0.78 Psyr_1549 lipoprotein, putative low > 86
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_3091 Membrane-associated zinc metalloprotease 0.79 Pf1N1B4_3333 Outer membrane protein NlpB, lipoprotein component of the protein assembly complex (forms a complex with YaeT, YfiO, and YfgL); Lipoprotein-34 precursor low > 87
Pseudomonas stutzeri RCH2 0.80 Psest_2835 RIP metalloprotease RseP 0.63 Psest_1516 Uncharacterized lipoprotein
Pseudomonas sp. S08-1 0.78 OH686_06450 RIP metalloprotease RseP 0.62 OH686_19220 Outer membrane beta-barrel assembly protein BamC
Marinobacter adhaerens HP15 0.51 HP15_1173 membrane-associated zinc metalloprotease 0.12 HP15_2026 lipoprotein low > 73
Dechlorosoma suillum PS 0.36 Dsui_2687 RIP metalloprotease RseP 0.13 Dsui_1978 putative lipoprotein 0.75 1
Variovorax sp. SCN45 0.33 GFF386 Membrane-associated zinc metalloprotease 0.12 GFF2741 FIG002207: Probable transmembrane protein low > 127
Herbaspirillum seropedicae SmR1 0.33 HSERO_RS10910 peptidase 0.12 HSERO_RS16390 lipoprotein
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS11840 zinc metalloprotease 0.12 RR42_RS06255 lipoprotein low > 128
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_00617 site-2 protease. Metallo peptidase. MEROPS family M50B 0.09 H281DRAFT_00510 Beta-barrel assembly machine subunit BamC
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS12105 zinc metalloprotease 0.09 BPHYT_RS12610 lipoprotein
Variovorax sp. OAS795 0.32 ABID97_RS17135 RIP metalloprotease RseP 0.14 ABID97_RS20130 outer membrane protein assembly factor BamC low > 91
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS06455 RIP metalloprotease RseP 0.09 QEN71_RS05945 outer membrane protein assembly factor BamC low > 153
Paraburkholderia graminis OAS925 0.32 ABIE53_002496 regulator of sigma E protease 0.09 ABIE53_002748 outer membrane protein assembly factor BamC 0.59 20
Ralstonia solanacearum UW163 0.30 UW163_RS13740 RIP metalloprotease RseP 0.14 UW163_RS12365 outer membrane protein assembly factor BamC
Ralstonia solanacearum IBSBF1503 0.30 RALBFv3_RS00410 RIP metalloprotease RseP 0.14 RALBFv3_RS14895 outer membrane protein assembly factor BamC low > 76
Ralstonia solanacearum GMI1000 0.30 RS_RS07080 RIP metalloprotease RseP 0.14 RS_RS05705 outer membrane protein assembly factor BamC
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS11860 RIP metalloprotease RseP 0.13 ABZR87_RS10550 outer membrane protein assembly factor BamC low > 80
Ralstonia solanacearum PSI07 0.29 RPSI07_RS17065 RIP metalloprotease RseP 0.14 RPSI07_RS18465 outer membrane protein assembly factor BamC
Acidovorax sp. GW101-3H11 0.28 Ac3H11_425 Membrane-associated zinc metalloprotease 0.12 Ac3H11_278 FIG002207: Probable transmembrane protein
Hydrogenophaga sp. GW460-11-11-14-LB1 0.25 GFF4908 Membrane-associated zinc metalloprotease 0.12 GFF5566 FIG002207: Probable transmembrane protein low > 90

Not shown: 52 genomes with orthologs for PP_1598 only; 0 genomes with orthologs for PP_1238 only