| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas putida KT2440 | 1.0 | PP_0261 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | 1.0 | PP_1063 | | DNA-binding transcriptional regulator, homocysteine-binding | 0.33 | 7 |
| Pseudomonas fluorescens SBW25-INTG | 0.75 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.95 | PFLU_RS05540 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.75 | PFLU_RS01390 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.95 | PFLU_RS05540 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas simiae WCS417 | 0.75 | PS417_01295 | | adenosine-3'(2'),5'-bisphosphate nucleotidase | 0.94 | PS417_05455 | | XRE family transcriptional regulator | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.74 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | 0.94 | Psyr_3917 | | transcriptional regulator, LysR family | 0.45 | 62 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.74 | Psyr_4940 | | 3'(2'),5'-bisphosphate nucleotidase | 0.94 | Psyr_3917 | | transcriptional regulator, LysR family | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.74 | PfGW456L13_403 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.95 | PfGW456L13_4778 | | Transcriptional activator MetR | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.74 | AO353_11850 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.95 | AO353_16210 | | XRE family transcriptional regulator | low | > 101 |
| Pseudomonas fluorescens FW300-N1B4 | 0.74 | Pf1N1B4_1668 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.95 | Pf1N1B4_784 | | Transcriptional activator MetR | low | > 87 |
| Pseudomonas fluorescens FW300-N2E2 | 0.72 | Pf6N2E2_3885 | | 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7) | 0.95 | Pf6N2E2_5471 | | Transcriptional activator MetR | low | > 103 |
| Pseudomonas sp. RS175 | 0.71 | PFR28_04887 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | 0.96 | PFR28_03478 | | HTH-type transcriptional regulator MetR | low | > 88 |
| Pseudomonas fluorescens FW300-N2C3 | 0.71 | AO356_10075 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.95 | AO356_17735 | | XRE family transcriptional regulator | low | > 104 |
| Pseudomonas stutzeri RCH2 | 0.68 | Psest_3960 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 0.90 | Psest_1450 | | Transcriptional regulator | — | — |
| Pseudomonas sp. S08-1 | 0.65 | OH686_14315 | | 3'(2'),5'-bisphosphate nucleotidase | 0.90 | OH686_20465 | | Transcriptional activator MetR | — | — |
| Shewanella oneidensis MR-1 | 0.45 | SO1655 | cysQ-2 | cysQ protein (NCBI ptt file) | 0.41 | SO0817 | metR | transcriptional activator protein MetR (NCBI ptt file) | 0.89 | 20 |
| Shewanella loihica PV-4 | 0.45 | Shew_1427 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.40 | Shew_2987 | | LysR family transcriptional regulator (RefSeq) | low | > 60 |
| Shewanella sp. ANA-3 | 0.45 | Shewana3_2791 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.41 | Shewana3_3470 | | LysR family transcriptional regulator (RefSeq) | low | > 73 |
| Shewanella amazonensis SB2B | 0.41 | Sama_2232 | | cysQ protein (RefSeq) | 0.40 | Sama_2628 | | transcriptional activator protein MetR (RefSeq) | 0.90 | 10 |
| Rahnella sp. WP5 | 0.39 | EX31_RS08720 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.43 | EX31_RS25370 | | HTH-type transcriptional regulator MetR | 0.85 | 64 |
| Enterobacter asburiae PDN3 | 0.38 | EX28DRAFT_3401 | | 3'(2'),5'-bisphosphate nucleotidase, bacterial | 0.45 | EX28DRAFT_4493 | | Transcriptional regulator | low | > 76 |
| Klebsiella michiganensis M5al | 0.38 | BWI76_RS02735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.42 | BWI76_RS01275 | | LysR family transcriptional regulator | 0.53 | 84 |
| Pantoea sp. MT58 | 0.38 | IAI47_02695 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.43 | IAI47_18315 | | HTH-type transcriptional regulator MetR | 0.85 | 48 |
| Dickeya dianthicola ME23 | 0.38 | DZA65_RS18320 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.43 | DZA65_RS00870 | | HTH-type transcriptional regulator MetR | 0.67 | 17 |
| Serratia liquefaciens MT49 | 0.38 | IAI46_01745 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.44 | IAI46_01030 | | HTH-type transcriptional regulator MetR | 0.47 | 56 |
| Enterobacter sp. TBS_079 | 0.38 | MPMX20_00492 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.46 | MPMX20_04452 | | HTH-type transcriptional regulator MetR | 0.65 | 4 |
| Escherichia coli ECRC62 | 0.37 | BNILDI_07225 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | BNILDI_05070 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECRC101 | 0.37 | OKFHMN_12035 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | OKFHMN_14330 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli BL21 | 0.37 | ECD_04086 | | 3'(2'),5'-bisphosphate nucleotidase | 0.45 | ECD_03707 | | methionine biosynthesis regulon transcriptional regulator | 0.53 | 12 |
| Escherichia coli ECRC102 | 0.37 | NIAGMN_09885 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | NIAGMN_12085 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECOR27 | 0.37 | NOLOHH_04295 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | NOLOHH_06460 | metR | HTH-type transcriptional regulator MetR | low | > 57 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.37 | OHPLBJKB_03819 | | '3'(2'),5'-bisphosphate nucleotidase CysQ' transl_table=11 | 0.45 | OHPLBJKB_04223 | | HTH-type transcriptional regulator MetR | low | > 73 |
| Escherichia coli ECRC98 | 0.37 | JDDGAC_15675 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | JDDGAC_17955 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli Nissle 1917 | 0.37 | ECOLIN_RS24480 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | ECOLIN_RS30005 | | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECRC99 | 0.37 | KEDOAH_16120 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | KEDOAH_13820 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia coli ECOR38 | 0.37 | HEPCGN_10230 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | HEPCGN_13030 | metR | HTH-type transcriptional regulator MetR | low | > 85 |
| Escherichia coli ECRC101 | 0.37 | MCAODC_02550 | cysQ | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | MCAODC_04835 | metR | HTH-type transcriptional regulator MetR | — | — |
| Escherichia fergusonii Becca | 0.37 | EFB2_04314 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.45 | EFB2_04809 | | HTH-type transcriptional regulator MetR | low | > 86 |
| Escherichia coli BW25113 | 0.37 | b4214 | cysQ | PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase (NCBI) | 0.45 | b3828 | metR | DNA-binding transcriptional activator, homocysteine-binding (NCBI) | 0.80 | 61 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.37 | GFF868 | | '3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7)' transl_table=11 | 0.44 | GFF253 | | Transcriptional activator MetR | low | > 78 |
| Vibrio cholerae E7946 ATCC 55056 | 0.37 | CSW01_13735 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.51 | CSW01_08580 | | HTH-type transcriptional regulator MetR | low | > 62 |
| Azospirillum sp. SherDot2 | 0.35 | MPMX19_01084 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.37 | MPMX19_00645 | | HTH-type transcriptional regulator MetR | low | > 112 |
| Acinetobacter radioresistens SK82 | 0.30 | MPMX26_01312 | | 3'(2'),5'-bisphosphate nucleotidase CysQ | 0.47 | MPMX26_01201 | | HTH-type transcriptional regulator MetR | — | — |
| Dinoroseobacter shibae DFL-12 | 0.29 | Dshi_3574 | | 3'(2'),5'-bisphosphate nucleotidase (RefSeq) | 0.46 | Dshi_2079 | | transcriptional regulator, LysR family (RefSeq) | — | — |
Not shown: 35 genomes with orthologs for PP_0261 only; 10 genomes with orthologs for PP_1063 only