Conservation of cofitness between PP_4015 and PP_1022 in Pseudomonas putida KT2440

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_4015 HflD-like high frequency lysogenization protein 1.0 PP_1022 glucose 6-phosphate-1-dehydrogenase 0.18 12
Pseudomonas sp. RS175 0.86 PFR28_02620 High frequency lysogenization protein HflD 0.84 PFR28_00573 Glucose-6-phosphate 1-dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.86 Pf6N2E2_285 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.85 Pf6N2E2_2885 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 103
Pseudomonas fluorescens FW300-N2C3 0.85 AO356_22105 DNA repair protein 0.85 AO356_05160 glucose-6-phosphate dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.84 AO353_27710 DNA repair protein 0.85 AO353_03360 glucose-6-phosphate dehydrogenase low > 101
Pseudomonas fluorescens GW456-L13 0.84 PfGW456L13_2638 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.85 PfGW456L13_1901 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 87
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_4047 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.85 Pf1N1B4_589 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) — —
Pseudomonas fluorescens SBW25-INTG 0.83 PFLU_RS18585 high frequency lysogenization protein HflD 0.85 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.83 PFLU_RS18585 high frequency lysogenization protein HflD 0.85 PFLU_RS23725 glucose-6-phosphate dehydrogenase low > 109
Pseudomonas simiae WCS417 0.83 PS417_16545 DNA repair protein 0.85 PS417_22110 glucose-6-phosphate dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.81 Psyr_3191 Protein of unknown function DUF489 0.85 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Pseudomonas syringae pv. syringae B728a 0.81 Psyr_3191 Protein of unknown function DUF489 0.85 Psyr_1120 glucose-6-phosphate 1-dehydrogenase low > 86
Pseudomonas sp. S08-1 0.79 OH686_00205 High frequency lysogenization protein HflD 0.79 OH686_02435 glucose-6-phosphate dehydrogenase low > 80
Pseudomonas stutzeri RCH2 0.77 Psest_2020 Uncharacterized protein involved in purine metabolism 0.78 Psest_0852 glucose-6-phosphate 1-dehydrogenase low > 67
Marinobacter adhaerens HP15 0.47 HP15_2087 protein belonging to uncharacterized protein family UPF0274 0.64 HP15_2179 glucose-6-phosphate 1-dehydrogenase low > 73
Pectobacterium carotovorum WPP14 0.38 HER17_RS11630 high frequency lysogenization protein HflD 0.52 HER17_RS11780 glucose-6-phosphate dehydrogenase low > 75
Serratia liquefaciens MT49 0.36 IAI46_10435 high frequency lysogenization protein HflD 0.52 IAI46_14575 glucose-6-phosphate dehydrogenase — —
Escherichia coli ECOR27 0.36 NOLOHH_20905 hflD high frequency lysogenization protein HflD 0.52 NOLOHH_16845 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC62 0.36 BNILDI_19070 hflD high frequency lysogenization protein HflD 0.52 BNILDI_15640 zwf glucose-6-phosphate dehydrogenase — —
Escherichia fergusonii Becca 0.36 EFB2_02843 High frequency lysogenization protein HflD 0.52 EFB2_02091 Glucose-6-phosphate 1-dehydrogenase low > 86
Escherichia coli ECOR38 0.36 HEPCGN_24215 hflD high frequency lysogenization protein HflD 0.52 HEPCGN_04740 zwf glucose-6-phosphate dehydrogenase low > 85
Escherichia coli BW25113 0.36 b1132 hflD hypothetical protein (NCBI) 0.52 b1852 zwf glucose-6-phosphate 1-dehydrogenase (NCBI) — —
Escherichia coli BL21 0.36 ECD_01130 putative lysogenization regulator 0.52 ECD_01823 glucose-6-phosphate 1-dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_02536 High frequency lysogenization protein HflD 0.52 OHPLBJKB_01877 Glucose-6-phosphate 1-dehydrogenase low > 73
Escherichia coli Nissle 1917 0.36 ECOLIN_RS06620 high frequency lysogenization protein HflD 0.52 ECOLIN_RS10315 glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.35 MCAODC_22345 hflD high frequency lysogenization protein HflD 0.52 MCAODC_19070 zwf glucose-6-phosphate dehydrogenase — —
Klebsiella michiganensis M5al 0.35 BWI76_RS11310 lysogenization protein HflD 0.53 BWI76_RS18105 glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC101 0.35 OKFHMN_00740 hflD high frequency lysogenization protein HflD 0.52 OKFHMN_26335 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC98 0.35 JDDGAC_06625 hflD high frequency lysogenization protein HflD 0.52 JDDGAC_00910 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC102 0.35 NIAGMN_24885 hflD high frequency lysogenization protein HflD 0.52 NIAGMN_01725 zwf glucose-6-phosphate dehydrogenase — —
Escherichia coli ECRC99 0.35 KEDOAH_24825 hflD high frequency lysogenization protein HflD 0.52 KEDOAH_01770 zwf glucose-6-phosphate dehydrogenase — —
Alteromonas macleodii MIT1002 0.35 MIT1002_01827 High frequency lysogenization protein HflD 0.56 MIT1002_02407 Glucose-6-phosphate 1-dehydrogenase low > 70
Dickeya dianthicola ME23 0.34 DZA65_RS11870 high frequency lysogenization protein HflD 0.52 DZA65_RS10580 glucose-6-phosphate dehydrogenase low > 75
Dickeya dianthicola 67-19 0.34 HGI48_RS11535 high frequency lysogenization protein HflD 0.52 HGI48_RS10165 glucose-6-phosphate dehydrogenase low > 71
Enterobacter sp. TBS_079 0.34 MPMX20_01816 High frequency lysogenization protein HflD 0.52 MPMX20_02757 Glucose-6-phosphate 1-dehydrogenase low > 85
Enterobacter asburiae PDN3 0.34 EX28DRAFT_1798 Uncharacterized protein involved in purine metabolism 0.52 EX28DRAFT_0704 glucose-6-phosphate 1-dehydrogenase — —
Rahnella sp. WP5 0.34 EX31_RS24570 high frequency lysogenization protein HflD 0.52 EX31_RS10630 glucose-6-phosphate dehydrogenase — —
Shewanella loihica PV-4 0.34 Shew_1559 hypothetical protein (RefSeq) 0.56 Shew_2048 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF3417 FIG002903: a protein of unknown function perhaps involved in purine metabolism 0.52 GFF1631 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) low > 78
Pantoea sp. MT58 0.33 IAI47_11920 high frequency lysogenization protein HflD 0.51 IAI47_08495 glucose-6-phosphate dehydrogenase — —
Erwinia tracheiphila SCR3 0.33 LU632_RS14580 hflD high frequency lysogenization protein HflD 0.51 LU632_RS13360 zwf glucose-6-phosphate dehydrogenase low > 74
Dickeya dadantii 3937 0.33 DDA3937_RS11490 high frequency lysogenization protein HflD 0.52 DDA3937_RS10135 glucose-6-phosphate dehydrogenase low > 74
Shewanella amazonensis SB2B 0.31 Sama_2063 hypothetical protein (RefSeq) 0.57 Sama_1812 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Shewanella sp. ANA-3 0.30 Shewana3_1746 hypothetical protein (RefSeq) 0.57 Shewana3_2151 glucose-6-phosphate 1-dehydrogenase (RefSeq) — —
Shewanella oneidensis MR-1 0.30 SO2634 conserved hypothetical protein (NCBI ptt file) 0.57 SO2489 zwf glucose-6-phosphate 1-dehydrogenase (NCBI ptt file) low > 76
Lysobacter sp. OAE881 0.26 ABIE51_RS11515 high frequency lysogenization protein HflD 0.48 ABIE51_RS01620 glucose-6-phosphate dehydrogenase — —

Not shown: 8 genomes with orthologs for PP_4015 only; 6 genomes with orthologs for PP_1022 only