Conservation of cofitness between PP_1860 and PP_0413 in Pseudomonas putida KT2440

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_1860 Organic hydroperoxide resistance transcriptional regulator 1.0 PP_0413 Polyamine ABC transporter, permease protein 0.36 6
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_19090 MarR family transcriptional regulator 0.85 AO353_07255 polyamine ABC transporter substrate-binding protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.76 Pf1N1B4_275 Organic hydroperoxide resistance transcriptional regulator 0.86 Pf1N1B4_2540 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 87
Pseudomonas fluorescens FW300-N2C3 0.76 AO356_03145 MarR family transcriptional regulator 0.85 AO356_14395 polyamine ABC transporter substrate-binding protein — —
Pseudomonas fluorescens SBW25-INTG 0.76 PFLU_RS08445 MarR family transcriptional regulator 0.81 PFLU_RS27405 ABC transporter permease low > 109
Pseudomonas fluorescens FW300-N2E2 0.76 Pf6N2E2_2458 Organic hydroperoxide resistance transcriptional regulator 0.86 Pf6N2E2_4817 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) — —
Pseudomonas fluorescens SBW25 0.76 PFLU_RS08445 MarR family transcriptional regulator 0.81 PFLU_RS27405 ABC transporter permease low > 109
Pseudomonas fluorescens GW456-L13 0.75 PfGW456L13_2237 Organic hydroperoxide resistance transcriptional regulator 0.86 PfGW456L13_1212 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) 0.51 38
Pseudomonas sp. RS175 0.75 PFR28_00973 Organic hydroperoxide resistance transcriptional regulator 0.86 PFR28_04052 hypothetical protein — —
Pseudomonas simiae WCS417 0.73 PS417_08495 MarR family transcriptional regulator 0.81 PS417_25750 polyamine ABC transporter substrate-binding protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_3626 transcriptional regulator, MarR family 0.84 Psyr_4613 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_3626 transcriptional regulator, MarR family 0.84 Psyr_4613 Binding-protein-dependent transport systems inner membrane component low > 86
Pseudomonas sp. S08-1 0.68 OH686_17660 Organic hydroperoxide resistance transcriptional regulator 0.78 OH686_15105 Spermidine/putrescine import ABC transporter permease protein PotB — —
Acidovorax sp. GW101-3H11 0.53 Ac3H11_4655 Organic hydroperoxide resistance transcriptional regulator 0.44 Ac3H11_4182 Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) low > 79
Pectobacterium carotovorum WPP14 0.52 HER17_RS06400 MarR family transcriptional regulator 0.52 HER17_RS09900 ABC transporter permease low > 75
Dickeya dianthicola ME23 0.51 DZA65_RS19880 MarR family transcriptional regulator 0.53 DZA65_RS12390 ABC transporter permease low > 75
Dickeya dianthicola 67-19 0.51 HGI48_RS18745 MarR family transcriptional regulator 0.53 HGI48_RS11845 ABC transporter permease low > 71
Dickeya dadantii 3937 0.50 DDA3937_RS18760 MarR family transcriptional regulator 0.53 DDA3937_RS11815 ABC transporter permease low > 74
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS33655 MarR family transcriptional regulator 0.56 BPHYT_RS34090 polyamine ABC transporter substrate-binding protein low > 109
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_06031 transcriptional regulator, MarR family 0.57 H281DRAFT_06600 putative spermidine/putrescine transport system permease protein — —
Ralstonia solanacearum PSI07 0.49 RPSI07_RS05140 MarR family transcriptional regulator 0.50 RPSI07_RS16230 ABC transporter permease low > 81
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS18415 MarR family transcriptional regulator 0.50 RALBFv3_RS01245 ABC transporter permease low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS20715 MarR family transcriptional regulator 0.50 UW163_RS14555 ABC transporter permease — —
Ralstonia solanacearum GMI1000 0.48 RS_RS22455 MarR family transcriptional regulator 0.50 RS_RS08750 ABC transporter permease low > 80
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS17840 MarR family transcriptional regulator 0.57 QEN71_RS17370 ABC transporter permease low > 153
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS15365 MarR family transcriptional regulator 0.55 HSERO_RS05405 polyamine ABC transporter substrate-binding protein low > 78
Variovorax sp. OAS795 0.47 ABID97_RS00925 MarR family transcriptional regulator 0.49 ABID97_RS21570 ABC transporter permease low > 91
Castellaniella sp019104865 MT123 0.47 ABCV34_RS12000 MarR family transcriptional regulator 0.47 ABCV34_RS01750 ABC transporter permease low > 48
Rahnella sp. WP5 0.47 EX31_RS05595 MarR family transcriptional regulator 0.55 EX31_RS00105 ABC transporter permease low > 89
Azospirillum brasilense Sp245 0.46 AZOBR_RS23440 MarR family transcriptional regulator 0.46 AZOBR_RS19650 polyamine ABC transporter substrate-binding protein low > 97
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS03665 MarR family transcriptional regulator 0.55 ABZR87_RS12700 ABC transporter permease low > 80
Azospirillum sp. SherDot2 0.44 MPMX19_00748 Organic hydroperoxide resistance transcriptional regulator 0.51 MPMX19_03279 hypothetical protein low > 112
Sinorhizobium meliloti 1021 0.43 SMc01945 transcriptional regulator 0.36 SMa1753 ABC transporter permease — —
Phaeobacter inhibens DSM 17395 0.37 PGA1_c34090 organic hydroperoxide resistance transcriptional regulator 0.42 PGA1_c34370 spermidine/putrescine transport system permease protein PotB low > 62

Not shown: 28 genomes with orthologs for PP_1860 only; 3 genomes with orthologs for PP_0413 only