Conservation of cofitness between PP_0120 and PP_0117 in Pseudomonas putida KT2440

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0120 putative zinc ABC transporter 1.0 PP_0117 Zn(2+) ABC transporter - permease subunit 0.82 1
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_597 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.86 PfGW456L13_600 Zinc ABC transporter, inner membrane permease protein ZnuB 0.75 1
Pseudomonas fluorescens FW300-N1B4 0.79 Pf1N1B4_1872 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.78 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB 0.93 1
Pseudomonas fluorescens FW300-N2E3 0.76 AO353_10915 ABC transporter substrate-binding protein 0.83 AO353_10900 hypothetical protein 0.87 1
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.80 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 0.80 2
Pseudomonas fluorescens SBW25 0.75 PFLU_RS00380 zinc ABC transporter substrate-binding protein ZnuA 0.80 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB 0.57 5
Pseudomonas sp. RS175 0.75 PFR28_04621 High-affinity zinc uptake system protein ZnuA 0.80 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB 0.45 2
Pseudomonas fluorescens FW300-N2E2 0.74 Pf6N2E2_4165 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.77 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB 0.81 1
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_11480 ABC transporter substrate-binding protein 0.77 AO356_11495 hypothetical protein 0.90 1
Pseudomonas syringae pv. syringae B728a 0.73 Psyr_0275 Periplasmic solute binding protein 0.87 Psyr_0278 ABC-3 0.69 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.73 Psyr_0275 Periplasmic solute binding protein 0.87 Psyr_0278 ABC-3 low > 86
Pseudomonas simiae WCS417 0.70 PS417_00390 ABC transporter substrate-binding protein 0.81 PS417_00375 membrane protein 0.37 1
Pseudomonas sp. S08-1 0.67 OH686_12235 Zinc ABC transporter, substrate-binding protein ZnuA 0.66 OH686_12250 Zinc ABC transporter, permease protein ZnuB 0.82 1
Pseudomonas stutzeri RCH2 0.62 Psest_4307 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.77 Psest_4310 ABC-type Mn2+/Zn2+ transport systems, permease components 0.17 48
Escherichia coli ECRC102 0.35 NIAGMN_01755 znuA zinc ABC transporter substrate-binding protein ZnuA 0.54 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB
Rhizobium sp. OAE497 0.35 ABIE40_RS10950 zinc ABC transporter substrate-binding protein ZnuA 0.55 ABIE40_RS10940 zinc ABC transporter permease subunit ZnuB low > 107
Escherichia coli ECRC101 0.35 MCAODC_19100 znuA zinc ABC transporter substrate-binding protein ZnuA 0.54 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC99 0.35 KEDOAH_01800 znuA zinc ABC transporter substrate-binding protein ZnuA 0.54 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC98 0.35 JDDGAC_00880 znuA zinc ABC transporter substrate-binding protein ZnuA 0.54 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC101 0.35 OKFHMN_26305 znuA zinc ABC transporter substrate-binding protein ZnuA 0.54 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.34 GFF1636 Zinc ABC transporter, periplasmic-binding protein ZnuA 0.55 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB low > 78
Pectobacterium carotovorum WPP14 0.34 HER17_RS11805 zinc ABC transporter substrate-binding protein ZnuA 0.49 HER17_RS11815 zinc ABC transporter permease subunit ZnuB low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01871 High-affinity zinc uptake system protein ZnuA 0.54 OHPLBJKB_01869 High-affinity zinc uptake system membrane protein ZnuB low > 73
Escherichia coli ECOR38 0.34 HEPCGN_04710 znuA zinc ABC transporter substrate-binding protein ZnuA 0.55 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB low > 85
Escherichia fergusonii Becca 0.34 EFB2_02085 High-affinity zinc uptake system protein ZnuA 0.55 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB low > 86
Enterobacter asburiae PDN3 0.34 EX28DRAFT_0699 ABC-type Zn2+ transport system, periplasmic component/surface adhesin 0.54 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components low > 76
Escherichia coli BW25113 0.34 b1857 yebL putative adhesin (VIMSS) 0.54 b1859 znuB high-affinity zinc transporter membrane component (NCBI) 0.86 1
Escherichia coli BL21 0.34 ECD_01828 zinc ABC transporter periplasmic binding protein 0.55 ECD_01830 zinc ABC transporter permease low > 60
Escherichia coli ECOR27 0.33 NOLOHH_16745 znuA zinc ABC transporter substrate-binding protein ZnuA 0.55 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC62 0.33 BNILDI_15535 znuA zinc ABC transporter substrate-binding protein ZnuA 0.55 BNILDI_15525 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli Nissle 1917 0.33 ECOLIN_RS10345 zinc ABC transporter substrate-binding protein ZnuA 0.55 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB
Agrobacterium fabrum C58 0.33 Atu1521 ABC transporter, substrate binding protein (zinc) 0.50 Atu1519 ABC transporter, membrane spanning protein (zinc) low > 89
Dickeya dianthicola 67-19 0.33 HGI48_RS10130 zinc ABC transporter substrate-binding protein ZnuA 0.52 HGI48_RS10120 zinc ABC transporter permease subunit ZnuB low > 71
Dickeya dadantii 3937 0.33 DDA3937_RS10100 zinc ABC transporter substrate-binding protein ZnuA 0.50 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB 0.64 3
Klebsiella michiganensis M5al 0.33 BWI76_RS18130 zinc ABC transporter substrate-binding protein 0.55 BWI76_RS18140 zinc ABC transporter permease 0.73 2
Pantoea sp. MT58 0.33 IAI47_08465 zinc ABC transporter substrate-binding protein ZnuA 0.54 IAI47_08455 zinc ABC transporter permease subunit ZnuB 0.81 1
Serratia liquefaciens MT49 0.32 IAI46_14605 zinc ABC transporter substrate-binding protein ZnuA 0.52 IAI46_14615 zinc ABC transporter permease subunit ZnuB low > 86
Erwinia tracheiphila SCR3 0.31 LU632_RS13395 znuA zinc ABC transporter substrate-binding protein ZnuA 0.53 LU632_RS13405 znuB zinc ABC transporter permease subunit ZnuB
Vibrio cholerae E7946 ATCC 55056 0.31 CSW01_10400 zinc ABC transporter substrate-binding protein 0.51 CSW01_10410 zinc ABC transporter permease low > 62
Dickeya dianthicola ME23 0.31 DZA65_RS10545 zinc ABC transporter substrate-binding protein ZnuA 0.52 DZA65_RS10535 zinc ABC transporter permease subunit ZnuB low > 75
Magnetospirillum magneticum AMB-1 0.30 AMB_RS11665 zinc ABC transporter substrate-binding protein 0.48 AMB_RS11680 zinc transporter
Sinorhizobium meliloti 1021 0.29 SMc04245 high-affinity zinc uptake system ABC transporter protein 0.51 SMc04243 high-affinity zinc uptake system membrane ABC transporter protein 0.91 1
Rahnella sp. WP5 0.29 EX31_RS10675 zinc ABC transporter substrate-binding protein ZnuA 0.53 EX31_RS10685 zinc ABC transporter permease subunit ZnuB low > 89
Azospirillum sp. SherDot2 0.29 MPMX19_05515 High-affinity zinc uptake system protein ZnuA 0.54 MPMX19_05517 High-affinity zinc uptake system membrane protein ZnuB low > 112
Azospirillum brasilense Sp245 0.27 AZOBR_RS01585 zinc transporter 0.48 AZOBR_RS01595 zinc transporter 0.62 1
Phaeobacter inhibens DSM 17395 0.25 PGA1_262p02220 ABC transporter, periplasmic solute-binding protein 0.36 PGA1_262p02250 high-affinity zinc uptake system membrane protein ZnuB
Dinoroseobacter shibae DFL-12 0.24 Dshi_1704 periplasmic solute binding protein (RefSeq) 0.41 Dshi_1701 ABC-3 protein (RefSeq) 0.77 1
Marinobacter adhaerens HP15 0.23 HP15_2237 ABC transporter metal-binding lipoprotein 0.59 HP15_3523 zinc ABC transporter, permease protein
Rhodopseudomonas palustris CGA009 0.16 TX73_004435 metal ABC transporter substrate-binding protein 0.20 TX73_004430 metal ABC transporter permease 0.91 2
Acinetobacter radioresistens SK82 0.14 MPMX26_00096 High-affinity zinc uptake system protein ZnuA 0.26 MPMX26_00093 High-affinity zinc uptake system membrane protein ZnuB 0.99 1

Not shown: 1 genomes with orthologs for PP_0120 only; 13 genomes with orthologs for PP_0117 only