Conservation of cofitness between PFLU_RS04350 and PFLU_RS21755 in Pseudomonas fluorescens SBW25

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens SBW25 1.0 PFLU_RS04350 metalloprotease PmbA 1.0 PFLU_RS21755 flagella biosynthesis chaperone FliJ 0.65 11
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS04350 metalloprotease PmbA 1.00 PFLU_RS21755 flagella biosynthesis chaperone FliJ low > 109
Pseudomonas simiae WCS417 0.98 PS417_04295 peptidase PmbA 0.98 PS417_19785 flagellar biogenesis protein 0.45 45
Pseudomonas fluorescens FW300-N2C3 0.96 AO356_07085 peptidase PmbA 0.85 AO356_03815 flagellar biogenesis protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3278 TldE protein, part of TldE/TldD proteolytic complex 0.86 Pf6N2E2_2589 Flagellar protein FliJ low > 103
Pseudomonas sp. RS175 0.95 PFR28_00163 Metalloprotease PmbA 0.85 PFR28_00836 Flagellar FliJ protein low > 88
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_05205 peptidase PmbA 0.84 AO353_18700 flagellar biogenesis protein low > 101
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_5024 TldE protein, part of TldE/TldD proteolytic complex 0.83 PfGW456L13_4349 Flagellar protein FliJ
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1090 TldE protein, part of TldE/TldD proteolytic complex 0.83 Pf1N1B4_3608 Flagellar protein FliJ
Pseudomonas putida KT2440 0.90 PP_0942 regulatory protease 0.70 PP_4365 Flagellar protein FliJ low > 96
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 0.75 Psyr_3453 flagellar protein FliJ, putative low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_4154 microcin-processing peptidase 1, Unknown type peptidase, MEROPS family U62 0.75 Psyr_3453 flagellar protein FliJ, putative low > 86
Pseudomonas sp. S08-1 0.81 OH686_08570 TldE protein, part of TldE/TldD proteolytic complex 0.68 OH686_02815 flagellar export protein FliJ low > 80
Pseudomonas stutzeri RCH2 0.77 Psest_3318 Predicted Zn-dependent proteases and their inactivated homologs 0.50 Psest_1723 flagellar export protein FliJ low > 67
Shewanella amazonensis SB2B 0.50 Sama_0482 PmbA protein (RefSeq) 0.18 Sama_2293 flagellar protein FliJ (RefSeq) low > 62
Pectobacterium carotovorum WPP14 0.50 HER17_RS20090 metalloprotease PmbA 0.21 HER17_RS08260 flagella biosynthesis chaperone FliJ low > 75
Rahnella sp. WP5 0.49 EX31_RS12320 metalloprotease PmbA 0.19 EX31_RS09560 flagella biosynthesis chaperone FliJ low > 89
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_10260 pmbA metalloprotease PmbA 0.18 OKGIIK_02765 fliJ flagellar export protein FliJ low > 52
Escherichia fergusonii Becca 0.48 EFB2_04298 Metalloprotease PmbA 0.19 EFB2_02004 Flagellar FliJ protein low > 86
Enterobacter asburiae PDN3 0.48 EX28DRAFT_3422 Predicted Zn-dependent proteases and their inactivated homologs 0.18 EX28DRAFT_0612 flagellar export protein FliJ low > 76
Enterobacter sp. TBS_079 0.48 MPMX20_00517 Metalloprotease PmbA 0.18 MPMX20_02939 Flagellar FliJ protein low > 85
Escherichia coli ECRC99 0.48 KEDOAH_16230 pmbA metalloprotease PmbA 0.19 KEDOAH_02400 fliJ flagella biosynthesis chaperone FliJ
Escherichia coli ECOR38 0.48 HEPCGN_10125 pmbA metalloprotease PmbA 0.19 HEPCGN_04055 fliJ flagella biosynthesis chaperone FliJ low > 87
Escherichia coli ECRC98 0.48 JDDGAC_15565 pmbA metalloprotease PmbA 0.19 JDDGAC_00280 fliJ flagella biosynthesis chaperone FliJ
Rhodanobacter denitrificans MT42 0.48 LRK55_RS03125 metalloprotease PmbA 0.22 LRK55_RS13255 flagellar export protein FliJ low > 63
Escherichia coli ECRC100 0.48 OKFHMN_11925 pmbA metalloprotease PmbA 0.19 OKFHMN_25695 fliJ flagella biosynthesis chaperone FliJ low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.48 OHPLBJKB_03800 Metalloprotease PmbA 0.19 OHPLBJKB_01787 Flagellar FliJ protein low > 73
Escherichia coli ECRC102 0.48 NIAGMN_09775 pmbA metalloprotease PmbA 0.19 NIAGMN_02360 fliJ flagella biosynthesis chaperone FliJ
Escherichia coli ECRC101 0.48 MCAODC_02430 pmbA metalloprotease PmbA 0.19 MCAODC_19700 fliJ flagella biosynthesis chaperone FliJ low > 87
Escherichia coli ECOR27 0.48 NOLOHH_04185 pmbA metalloprotease PmbA 0.19 NOLOHH_16325 fliJ flagella biosynthesis chaperone FliJ low > 75
Escherichia coli ECRC62 0.48 BNILDI_07325 pmbA metalloprotease PmbA 0.19 BNILDI_15115 fliJ flagella biosynthesis chaperone FliJ low > 75
Escherichia coli Nissle 1917 0.48 ECOLIN_RS24570 metalloprotease PmbA 0.19 ECOLIN_RS11080 flagellar export protein FliJ
Escherichia coli BW25113 0.48 b4235 pmbA predicted peptidase required for the maturation and secretion of the antibiotic peptide MccB17 (NCBI) 0.19 b1942 fliJ flagellar biosynthesis chaperone (NCBI) low > 76
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS03375 metalloprotease PmbA 0.22 LRK54_RS13515 flagellar export protein FliJ low > 59
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF904 TldE protein, part of TldE/TldD proteolytic complex 0.17 GFF4014 Flagellar protein FliJ low > 78
Serratia liquefaciens MT49 0.48 IAI46_22575 metalloprotease PmbA 0.21 IAI46_15860 flagella biosynthesis chaperone FliJ low > 86
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS21700 metalloprotease PmbA 0.26 ABZR86_RS20190 flagellar export protein FliJ low > 74
Erwinia tracheiphila SCR3 0.47 LU632_RS02145 pmbA metalloprotease PmbA 0.18 LU632_RS10555 fliJ flagella biosynthesis chaperone FliJ low > 74
Dickeya dianthicola 67-19 0.47 HGI48_RS01415 metalloprotease PmbA 0.19 HGI48_RS13430 flagella biosynthesis chaperone FliJ low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS01480 metalloprotease PmbA 0.19 DZA65_RS13915 flagella biosynthesis chaperone FliJ low > 75
Dickeya dadantii 3937 0.47 DDA3937_RS01500 metalloprotease PmbA 0.18 DDA3937_RS13385 flagella biosynthesis chaperone FliJ 0.82 7
Variovorax sp. SCN45 0.46 GFF4697 TldE protein, part of TldE/TldD proteolytic complex 0.18 GFF5746 Flagellar protein FliJ low > 127
Herbaspirillum seropedicae SmR1 0.45 HSERO_RS09265 peptidase C69 0.18 HSERO_RS10290 flagellar biosynthesis protein FliJ low > 78
Ralstonia solanacearum IBSBF1503 0.44 RALBFv3_RS13965 metalloprotease PmbA 0.23 RALBFv3_RS21570 flagellar export protein FliJ low > 76
Ralstonia solanacearum UW163 0.44 UW163_RS15845 metalloprotease PmbA 0.23 UW163_RS17620 flagellar export protein FliJ
Ralstonia sp. UNC404CL21Col 0.44 ABZR87_RS09660 metalloprotease PmbA 0.20 ABZR87_RS22060 flagellar export protein FliJ low > 80
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS04270 metalloprotease PmbA 0.18 QEN71_RS28815 flagellar export protein FliJ 0.77 69
Cupriavidus basilensis FW507-4G11 0.44 RR42_RS14750 peptidase PMbA 0.17 RR42_RS23550 flagellar export protein FliJ low > 128
Ralstonia solanacearum PSI07 0.43 RPSI07_RS19505 metalloprotease PmbA 0.25 RPSI07_RS01555 flagellar export protein FliJ low > 81

Not shown: 38 genomes with orthologs for PFLU_RS04350 only; 1 genomes with orthologs for PFLU_RS21755 only