Conservation of cofitness between OKFHMN_09385 and OKFHMN_22870 in Escherichia coli ECRC100

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_09385 fimB integrase 1.0 OKFHMN_22870 nuoH NADH-quinone oxidoreductase subunit NuoH 0.67 5
Escherichia coli ECRC98 1.00 JDDGAC_13020 fimB integrase 1.00 JDDGAC_26835 nuoH NADH-quinone oxidoreductase subunit NuoH low > 86
Escherichia coli ECRC102 1.00 NIAGMN_07435 fimB integrase 1.00 NIAGMN_20640 nuoH NADH-quinone oxidoreductase subunit NuoH — —
Klebsiella michiganensis M5al 0.91 BWI76_RS05825 putative site specific integrase 0.97 BWI76_RS20160 NADH-quinone oxidoreductase subunit H low > 92
Enterobacter asburiae PDN3 0.90 EX28DRAFT_2648 Integrase 0.96 EX28DRAFT_0328 NADH:ubiquinone oxidoreductase subunit 1 (chain H) low > 76
Pectobacterium carotovorum WPP14 0.75 HER17_RS04720 tyrosine-type recombinase/integrase 0.92 HER17_RS07155 NADH-quinone oxidoreductase subunit NuoH low > 75
Dickeya dadantii 3937 0.66 DDA3937_RS16520 tyrosine-type recombinase/integrase 0.85 DDA3937_RS14305 NADH-quinone oxidoreductase subunit NuoH — —
Rahnella sp. WP5 0.66 EX31_RS20945 tyrosine-type recombinase/integrase 0.89 EX31_RS19405 NADH-quinone oxidoreductase subunit NuoH low > 89
Serratia liquefaciens MT49 0.65 IAI46_05415 tyrosine-type recombinase/integrase 0.90 IAI46_17680 NADH-quinone oxidoreductase subunit NuoH low > 86
Dickeya dianthicola 67-19 0.63 HGI48_RS14775 tyrosine-type recombinase/integrase 0.86 HGI48_RS14280 NADH-quinone oxidoreductase subunit NuoH low > 71
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS02275 integrase arm-type DNA-binding domain-containing protein 0.33 ABZR86_RS06080 NADH-quinone oxidoreductase subunit NuoH — —
Dechlorosoma suillum PS 0.40 Dsui_0218 Integrase 0.35 Dsui_3043 NADH:ubiquinone oxidoreductase subunit 1 (chain H) — —
Pseudomonas sp. S08-1 0.40 OH686_21775 Phage integrase 0.72 OH686_00125 NADH-ubiquinone oxidoreductase chain H low > 80
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU1527 site-specific recombinase, phage integrase family (TIGR) 0.16 DVU2287 hydrogenase, CooK subunit, selenocysteine-containing, putative (TIGR) low > 55
Dickeya dianthicola ME23 0.39 DZA65_RS04000 tyrosine-type recombinase/integrase 0.86 DZA65_RS14955 NADH-quinone oxidoreductase subunit NuoH — —
Pseudomonas simiae WCS417 0.38 PS417_10250 integrase 0.74 PS417_16605 NADH:ubiquinone oxidoreductase — —
Pseudomonas fluorescens SBW25-INTG 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.74 PFLU_RS18645 NADH-quinone oxidoreductase subunit NuoH low > 109
Pseudomonas fluorescens SBW25 0.37 PFLU_RS09280 DUF4102 domain-containing protein 0.74 PFLU_RS18645 NADH-quinone oxidoreductase subunit NuoH low > 109
Pseudomonas fluorescens FW300-N2E3 0.36 AO353_11495 integrase 0.76 AO353_27770 NADH:ubiquinone oxidoreductase — —
Sphingomonas koreensis DSMZ 15582 0.36 Ga0059261_1748 Integrase 0.34 Ga0059261_0702 NADH dehydrogenase subunit H (EC 1.6.5.3) — —
Shewanella oneidensis MR-1 0.35 SO1471 site-specific recombinase, phage integrase family (NCBI ptt file) 0.76 SO1015 nuoH NADH dehydrogenase I, H subunit (NCBI ptt file) low > 76
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS18370 integrase 0.38 RR42_RS05545 NADH:ubiquinone oxidoreductase subunit H — —
Rhodanobacter denitrificans MT42 0.32 LRK55_RS10445 tyrosine-type recombinase/integrase 0.36 LRK55_RS00870 NADH-quinone oxidoreductase subunit NuoH — —
Lysobacter sp. OAE881 0.30 ABIE51_RS08660 site-specific integrase 0.33 ABIE51_RS08345 NADH-quinone oxidoreductase subunit NuoH — —
Ralstonia solanacearum UW163 0.29 UW163_RS08775 integrase 0.40 UW163_RS10785 NADH-quinone oxidoreductase subunit H — —
Ralstonia solanacearum PSI07 0.28 RPSI07_RS12430 DUF4102 domain-containing protein 0.40 RPSI07_RS14370 NADH-quinone oxidoreductase subunit NuoH — —
Pseudomonas fluorescens FW300-N1B4 0.27 Pf1N1B4_3004 Integrase 0.76 Pf1N1B4_4034 NADH-ubiquinone oxidoreductase chain H (EC 1.6.5.3) — —
Paraburkholderia sabiae LMG 24235 0.24 QEN71_RS10240 tyrosine-type recombinase/integrase 0.37 QEN71_RS24115 NADH-quinone oxidoreductase subunit NuoH — —
Rhodopseudomonas palustris CGA009 0.24 TX73_011375 tyrosine-type recombinase/integrase 0.47 TX73_022060 NADH-quinone oxidoreductase subunit NuoH low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_01203 Prophage integrase IntA 1.00 OHPLBJKB_01424 NADH-quinone oxidoreductase subunit H low > 73
Rhodospirillum rubrum S1H 0.24 Rru_A0354 Phage integrase (NCBI) 0.43 Rru_A1562 Respiratory-chain NADH dehydrogenase, subunit 1 (NCBI) — —
Burkholderia phytofirmans PsJN 0.23 BPHYT_RS32385 integrase 0.39 BPHYT_RS06660 NADH-quinone oxidoreductase subunit H — —
Azospirillum brasilense Sp245 0.13 AZOBR_RS30360 integrase 0.42 AZOBR_RS07200 NADH:ubiquinone oxidoreductase subunit H — —
Dinoroseobacter shibae DFL-12 0.09 Dshi_3213 integrase family protein (RefSeq) 0.34 Dshi_1321 NADH dehydrogenase (quinone) (RefSeq) — —

Not shown: 4 genomes with orthologs for OKFHMN_09385 only; 56 genomes with orthologs for OKFHMN_22870 only