Conservation of cofitness between OH686_00920 and OH686_09485 in Pseudomonas sp. S08-1

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas sp. S08-1 1.0 OH686_00920 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA 1.0 OH686_09485 N-acetylmuramoyl-L-alanine amidase 0.70 5
Pseudomonas stutzeri RCH2 0.58 Psest_2138 RND family efflux transporter, MFP subunit 0.74 Psest_0680 N-acetylmuramoyl-L-alanine amidase — —
Pseudomonas fluorescens FW300-N2E2 0.58 Pf6N2E2_1273 Probable RND efflux membrane fusion protein 0.68 Pf6N2E2_3617 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) 0.28 37
Pseudomonas sp. RS175 0.58 PFR28_02195 Multidrug resistance protein MdtA 0.71 PFR28_05118 N-acetylmuramoyl-L-alanine amidase AmiC low > 88
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_3267 RND transporter, membrane fusion protein 0.68 PfGW456L13_157 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 87
Pseudomonas fluorescens FW300-N2C3 0.56 AO356_25870 secretion protein HlyD 0.69 AO356_08670 N-acetylmuramoyl-L-alanine amidase 0.44 6
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_2482 Secretion protein HlyD 0.71 Psyr_0569 N-acetylmuramoyl-L-alanine amidase low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_2482 Secretion protein HlyD 0.71 Psyr_0569 N-acetylmuramoyl-L-alanine amidase low > 86
Pseudomonas fluorescens FW300-N1B4 0.56 Pf1N1B4_4664 RND transporter, membrane fusion protein 0.68 Pf1N1B4_1415 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) — —
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS13425 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.68 PFLU_RS02555 AMIN domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.55 PFLU_RS13425 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.68 PFLU_RS02555 AMIN domain-containing protein low > 109
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22890 secretion protein HlyD 0.68 AO353_13130 N-acetylmuramoyl-L-alanine amidase low > 101
Pseudomonas simiae WCS417 0.55 PS417_12740 secretion protein HlyD 0.68 PS417_02475 N-acetylmuramoyl-L-alanine amidase low > 88
Pseudomonas putida KT2440 0.54 PP_3585 multidrug efflux transport system - putative membrane fusion protein 0.73 PP_4897 N-acetylmuramoyl-L-alanine amidase 0.13 64
Ralstonia sp. UNC404CL21Col 0.45 ABZR87_RS19030 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.30 ABZR87_RS00765 N-acetylmuramoyl-L-alanine amidase low > 80
Pantoea sp. MT58 0.43 IAI47_06875 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.29 IAI47_02575 N-acetylmuramoyl-L-alanine amidase AmiB low > 76
Enterobacter sp. TBS_079 0.43 MPMX20_03060 Multidrug resistance protein MdtA 0.28 MPMX20_03680 N-acetylmuramoyl-L-alanine amidase AmiC low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_01630 Multidrug resistance protein MdtA 0.28 OHPLBJKB_00913 N-acetylmuramoyl-L-alanine amidase AmiC low > 73
Escherichia coli BW25113 0.42 b2074 b2074 putative membrane protein (VIMSS) 0.28 b2817 b2817 putative amidase (VIMSS) low > 76
Escherichia coli ECRC62 0.42 BNILDI_14460 mdtA multidrug efflux RND transporter subunit MdtA 0.28 BNILDI_10430 amiC N-acetylmuramoyl-L-alanine amidase AmiC low > 75
Escherichia coli Nissle 1917 0.42 ECOLIN_RS12195 multidrug efflux RND transporter subunit MdtA 0.28 ECOLIN_RS15815 N-acetylmuramoyl-L-alanine amidase AmiC low > 55
Escherichia coli ECRC99 0.42 KEDOAH_03950 mdtA multidrug efflux RND transporter subunit MdtA 0.28 KEDOAH_08065 amiC N-acetylmuramoyl-L-alanine amidase AmiC — —
Escherichia coli ECRC100 0.42 OKFHMN_24200 mdtA multidrug efflux RND transporter subunit MdtA 0.28 OKFHMN_20065 amiC N-acetylmuramoyl-L-alanine amidase AmiC 0.54 28
Escherichia coli ECRC98 0.42 JDDGAC_28310 mdtA multidrug efflux RND transporter subunit MdtA 0.28 JDDGAC_23730 amiC N-acetylmuramoyl-L-alanine amidase AmiC low > 86
Escherichia coli BL21 0.42 ECD_01979 multidrug efflux system, subunit A 0.28 ECD_02665 N-acetylmuramoyl-L-alanine amidase low > 61
Dickeya dadantii 3937 0.42 DDA3937_RS15260 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.30 DDA3937_RS18625 N-acetylmuramoyl-L-alanine amidase AmiB low > 74
Escherichia coli ECRC101 0.42 MCAODC_20740 mdtA multidrug efflux RND transporter subunit MdtA 0.28 MCAODC_10590 amiC N-acetylmuramoyl-L-alanine amidase AmiC low > 87
Escherichia coli ECRC102 0.42 NIAGMN_22145 mdtA multidrug efflux RND transporter subunit MdtA 0.28 NIAGMN_17835 amiC N-acetylmuramoyl-L-alanine amidase AmiC — —
Escherichia coli ECOR38 0.42 HEPCGN_02890 mdtA multidrug efflux RND transporter subunit MdtA 0.28 HEPCGN_19320 amiC N-acetylmuramoyl-L-alanine amidase AmiC low > 87
Escherichia fergusonii Becca 0.42 EFB2_01781 Multidrug resistance protein MdtA 0.28 EFB2_01067 N-acetylmuramoyl-L-alanine amidase AmiC low > 86
Escherichia coli ECOR27 0.42 NOLOHH_15545 mdtA multidrug efflux RND transporter subunit MdtA 0.28 NOLOHH_11950 amiC N-acetylmuramoyl-L-alanine amidase AmiC low > 75
Dickeya dianthicola 67-19 0.41 HGI48_RS15340 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.31 HGI48_RS18560 N-acetylmuramoyl-L-alanine amidase AmiB low > 71
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS07790 RND transporter MFP subunit 0.29 BPHYT_RS15970 N-acetylmuramoyl-L-alanine amidase — —
Pectobacterium carotovorum WPP14 0.41 HER17_RS06325 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.30 HER17_RS02570 N-acetylmuramoyl-L-alanine amidase AmiB low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF3855 Multidrug transporter MdtA 0.28 GFF1298 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 78
Rahnella sp. WP5 0.40 EX31_RS13385 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 EX31_RS08835 N-acetylmuramoyl-L-alanine amidase AmiB low > 89
Dickeya dianthicola ME23 0.39 DZA65_RS16160 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.31 DZA65_RS19695 N-acetylmuramoyl-L-alanine amidase AmiB 0.36 33
Castellaniella sp019104865 MT123 0.39 ABCV34_RS14615 efflux RND transporter periplasmic adaptor subunit 0.32 ABCV34_RS08775 N-acetylmuramoyl-L-alanine amidase — —
Erwinia tracheiphila SCR3 0.39 LU632_RS08695 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.28 LU632_RS06215 amiC N-acetylmuramoyl-L-alanine amidase AmiC low > 74
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF486 Probable Co/Zn/Cd efflux system membrane fusion protein 0.28 GFF5476 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 90
Serratia liquefaciens MT49 0.38 IAI46_18970 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.29 IAI46_20390 N-acetylmuramoyl-L-alanine amidase low > 86
Variovorax sp. SCN45 0.35 GFF6660 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA 0.22 GFF4803 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 127
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.4791.1 Probable Co/Zn/Cd efflux system membrane fusion protein 0.25 Xcc-8004.3058.1 N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28) low > 74
Dyella japonica UNC79MFTsu3.2 0.30 ABZR86_RS16315 efflux RND transporter periplasmic adaptor subunit 0.33 ABZR86_RS00850 N-acetylmuramoyl-L-alanine amidase — —
Rhodanobacter sp. FW510-T8 0.28 OKGIIK_16100 HlyD-D23 domain-containing protein 0.33 OKGIIK_03915 N-acetylmuramoyl-L-alanine amidase — —
Rhodanobacter denitrificans FW104-10B01 0.26 LRK54_RS09840 efflux RND transporter periplasmic adaptor subunit 0.32 LRK54_RS15145 N-acetylmuramoyl-L-alanine amidase — —
Rhodanobacter denitrificans MT42 0.26 LRK55_RS09500 efflux RND transporter periplasmic adaptor subunit 0.32 LRK55_RS14860 N-acetylmuramoyl-L-alanine amidase — —

Not shown: 9 genomes with orthologs for OH686_00920 only; 16 genomes with orthologs for OH686_09485 only