Conservation of cofitness between NOLOHH_20595 and NOLOHH_11445 in Escherichia coli ECOR27

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_20595 sirB1 invasion regulator SirB1 1.0 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase low > 75
Escherichia coli BW25113 1.00 b1214 ychA predicted transcriptional regulator (NCBI) 1.00 b2903 gcvP glycine dehydrogenase (NCBI) low > 76
Escherichia coli ECRC99 1.00 KEDOAH_25460 sirB1 invasion regulator SirB1 1.00 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli ECRC102 1.00 NIAGMN_27770 sirB1 invasion regulator SirB1 1.00 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase — —
Escherichia coli ECRC100 1.00 OKFHMN_28465 sirB1 invasion regulator SirB1 1.00 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase low > 80
Escherichia coli ECRC101 1.00 MCAODC_21795 sirB1 invasion regulator SirB1 1.00 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase low > 87
Escherichia coli ECOR38 1.00 HEPCGN_24930 sirB1 invasion regulator SirB1 1.00 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase low > 87
Escherichia coli BL21 1.00 ECD_01189 transglutaminase-like TPR-repeat protein 0.99 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02473 hypothetical protein 1.00 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.57 58
Escherichia coli ECRC98 1.00 JDDGAC_06110 sirB1 invasion regulator SirB1 1.00 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase low > 86
Escherichia coli ECRC62 1.00 BNILDI_18750 sirB1 invasion regulator SirB1 0.99 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase low > 75
Escherichia fergusonii Becca 1.00 EFB2_02713 hypothetical protein 1.00 EFB2_00999 Glycine dehydrogenase (decarboxylating) low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07335 invasion regulator SirB1 1.00 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF2771 FIG002708: Protein SirB1 0.92 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_0833 Uncharacterized conserved protein 0.88 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_02633 hypothetical protein 0.89 MPMX20_03762 Glycine dehydrogenase (decarboxylating) low > 85
Klebsiella michiganensis M5al 0.78 BWI76_RS17420 hypothetical protein 0.89 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) low > 92
Pectobacterium carotovorum WPP14 0.68 HER17_RS10495 invasion regulator SirB1 0.80 HER17_RS17995 aminomethyl-transferring glycine dehydrogenase low > 75
Dickeya dadantii 3937 0.67 DDA3937_RS10980 tetratricopeptide repeat-containing protein 0.80 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase low > 74
Dickeya dianthicola 67-19 0.67 HGI48_RS10930 tetratricopeptide repeat-containing protein 0.80 HGI48_RS03400 aminomethyl-transferring glycine dehydrogenase — —
Dickeya dianthicola ME23 0.67 DZA65_RS11390 tetratricopeptide repeat-containing protein 0.80 DZA65_RS03445 aminomethyl-transferring glycine dehydrogenase low > 75
Pantoea sp. MT58 0.65 IAI47_11255 tetratricopeptide repeat-containing protein 0.82 IAI47_03775 aminomethyl-transferring glycine dehydrogenase — —
Serratia liquefaciens MT49 0.64 IAI46_10295 tetratricopeptide repeat-containing protein 0.82 IAI46_20850 aminomethyl-transferring glycine dehydrogenase low > 86
Rahnella sp. WP5 0.63 EX31_RS07300 tetratricopeptide repeat-containing protein 0.81 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase low > 89
Erwinia tracheiphila SCR3 0.60 LU632_RS10745 sirB1 invasion regulator SirB1 0.81 LU632_RS05915 gcvP aminomethyl-transferring glycine dehydrogenase low > 74
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_10830 hypothetical protein 0.58 CSW01_15330 glycine dehydrogenase (decarboxylating) low > 62
Shewanella sp. ANA-3 0.20 Shewana3_0773 hypothetical protein (RefSeq) 0.67 Shewana3_3499 glycine dehydrogenase (RefSeq) low > 73
Ralstonia solanacearum GMI1000 0.19 RS_RS12825 transglutaminase 0.54 RS_RS16510 glycine dehydrogenase low > 80
Ralstonia solanacearum PSI07 0.19 RPSI07_RS12095 transglutaminase 0.55 RPSI07_RS08575 glycine dehydrogenase (aminomethyl-transferring) low > 81
Cupriavidus basilensis FW507-4G11 0.19 RR42_RS17195 transglutaminase 0.55 RR42_RS20070 glycine dehydrogenase low > 128
Shewanella oneidensis MR-1 0.19 SO3829 conserved hypothetical protein (NCBI ptt file) 0.67 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) low > 76
Ralstonia sp. UNC404CL21Col 0.19 ABZR87_RS00860 SirB1 family protein 0.54 ABZR87_RS03935 aminomethyl-transferring glycine dehydrogenase low > 80
Ralstonia solanacearum IBSBF1503 0.19 RALBFv3_RS05205 transglutaminase 0.55 RALBFv3_RS08660 glycine dehydrogenase (aminomethyl-transferring) low > 76
Ralstonia solanacearum UW163 0.19 UW163_RS08420 transglutaminase 0.55 UW163_RS04950 glycine dehydrogenase (aminomethyl-transferring) — —
Paraburkholderia graminis OAS925 0.18 ABIE53_003350 regulator of sirC expression with transglutaminase-like and TPR domain 0.56 ABIE53_000238 glycine dehydrogenase 0.35 81
Burkholderia phytofirmans PsJN 0.18 BPHYT_RS15895 transglutaminase 0.56 BPHYT_RS19330 glycine cleavage system P protein (EC 1.4.4.2) (from data) low > 109
Paraburkholderia bryophila 376MFSha3.1 0.18 H281DRAFT_04115 Regulator of sirC expression, contains transglutaminase-like and TPR domains 0.56 H281DRAFT_02409 glycine dehydrogenase low > 103
Paraburkholderia sabiae LMG 24235 0.18 QEN71_RS02805 SirB1 family protein 0.55 QEN71_RS29215 aminomethyl-transferring glycine dehydrogenase low > 153
Shewanella loihica PV-4 0.17 Shew_2906 hypothetical protein (RefSeq) 0.66 Shew_3062 glycine dehydrogenase (RefSeq) low > 60
Xanthomonas campestris pv. campestris strain 8004 0.14 Xcc-8004.1134.1 Protein sirB1 0.54 Xcc-8004.3878.1 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 74
Variovorax sp. OAS795 0.13 ABID97_RS08655 tetratricopeptide repeat protein 0.54 ABID97_RS19655 aminomethyl-transferring glycine dehydrogenase low > 91
Variovorax sp. SCN45 0.13 GFF3931 Protein sirB1 0.54 GFF6478 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF3424 Protein sirB1 0.52 GFF5215 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 90
Pseudomonas simiae WCS417 0.12 PS417_05035 hypothetical protein 0.56 PS417_22360 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) low > 88
Acidovorax sp. GW101-3H11 0.12 Ac3H11_1327 Protein sirB1 0.52 Ac3H11_167 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) low > 79

Not shown: 2 genomes with orthologs for NOLOHH_20595 only; 41 genomes with orthologs for NOLOHH_11445 only