Conservation of cofitness between NOLOHH_07425 and NOLOHH_05680 in Escherichia coli ECOR27

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_07425 recG ATP-dependent DNA helicase RecG 1.0 NOLOHH_05680 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia coli ECRC62 1.00 BNILDI_04090 recG ATP-dependent DNA helicase RecG 1.00 BNILDI_05845 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Escherichia coli ECRC101 0.99 MCAODC_06055 recG ATP-dependent DNA helicase RecG 0.99 MCAODC_04035 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Escherichia coli ECRC102 0.99 NIAGMN_13305 recG ATP-dependent DNA helicase RecG 1.00 NIAGMN_11285 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Escherichia coli ECRC99 0.99 KEDOAH_12600 recG ATP-dependent DNA helicase RecG 1.00 KEDOAH_14625 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA — —
Escherichia coli ECRC98 0.99 JDDGAC_19170 recG ATP-dependent DNA helicase RecG 1.00 JDDGAC_17160 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 86
Escherichia coli ECRC100 0.99 OKFHMN_15545 recG ATP-dependent DNA helicase RecG 1.00 OKFHMN_13535 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 80
Escherichia fergusonii Becca 0.99 EFB2_00136 ATP-dependent DNA helicase RecG 0.99 EFB2_04645 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 86
Escherichia coli Nissle 1917 0.99 ECOLIN_RS20800 ATP-dependent DNA helicase RecG 0.99 ECOLIN_RS22900 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 55
Escherichia coli BL21 0.99 ECD_03509 ATP-dependent DNA helicase 1.00 ECD_03850 tRNA m(5)U54 methyltransferase, SAM-dependent; tmRNA m(5)U341 methyltransferase low > 61
Escherichia coli BW25113 0.99 b3652 recG ATP-dependent DNA helicase (NCBI) 1.00 b3965 trmA tRNA (uracil-5-)-methyltransferase (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00049 ATP-dependent DNA helicase RecG 1.00 OHPLBJKB_04085 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 73
Escherichia coli ECOR38 0.99 HEPCGN_14365 recG ATP-dependent DNA helicase RecG 0.99 HEPCGN_12190 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF355 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.94 GFF2351 tRNA (uracil(54)-C5)-methyltransferase (EC 2.1.1.35) low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3901 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.92 EX28DRAFT_4428 tRNA (uracil(54)-C(5))-methyltransferase low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_00084 ATP-dependent DNA helicase RecG 0.93 MPMX20_04515 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 85
Klebsiella michiganensis M5al 0.91 BWI76_RS27440 DNA helicase RecG 0.93 BWI76_RS00885 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 92
Serratia liquefaciens MT49 0.84 IAI46_24905 ATP-dependent DNA helicase RecG 0.82 IAI46_24455 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 86
Pantoea sp. MT58 0.83 IAI47_00500 ATP-dependent DNA helicase RecG 0.83 IAI47_00950 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 76
Erwinia tracheiphila SCR3 0.82 LU632_RS22190 recG ATP-dependent DNA helicase RecG 0.78 LU632_RS19550 trmA tRNA (uridine(54)-C5)-methyltransferase TrmA low > 74
Pectobacterium carotovorum WPP14 0.81 HER17_RS21395 ATP-dependent DNA helicase RecG 0.80 HER17_RS00975 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS00170 ATP-dependent DNA helicase RecG 0.81 DDA3937_RS00990 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 74
Rahnella sp. WP5 0.80 EX31_RS15820 ATP-dependent DNA helicase RecG 0.77 EX31_RS14140 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS21190 ATP-dependent DNA helicase RecG 0.80 HGI48_RS20385 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS22160 ATP-dependent DNA helicase RecG 0.80 DZA65_RS21430 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 75
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13680 DNA helicase RecG 0.65 CSW01_00785 tRNA (uridine(54)-C5)-methyltransferase TrmA low > 62
Shewanella amazonensis SB2B 0.66 Sama_3375 ATP-dependent DNA helicase RecG (RefSeq) 0.60 Sama_0193 tRNA (uracil-5-)-methyltransferase (RefSeq) low > 62
Shewanella sp. ANA-3 0.65 Shewana3_0348 ATP-dependent DNA helicase RecG (RefSeq) 0.60 Shewana3_0179 tRNA (uracil-5-)-methyltransferase (RefSeq) low > 73
Shewanella loihica PV-4 0.64 Shew_3507 ATP-dependent DNA helicase RecG (RefSeq) 0.61 Shew_0138 tRNA (uracil-5-)-methyltransferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.64 SO4364 recG ATP-dependent DNA helicase RecG (NCBI ptt file) 0.60 SO0206 trmA tRNA (uracil-5-)-methyltransferase (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.62 MIT1002_00111 ATP-dependent DNA helicase RecG 0.59 MIT1002_03370 tRNA (uracil(54)-C(5))-methyltransferase low > 70
Pseudomonas stutzeri RCH2 0.55 Psest_4192 ATP-dependent DNA helicase RecG 0.50 Psest_3451 tRNA (uracil-5-)-methyltransferase — —
Pseudomonas putida KT2440 0.55 PP_5310 junction-specific ATP-dependent DNA helicase 0.48 PP_4654 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 96
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_772 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.47 PfGW456L13_1430 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 87
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2105 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.47 Pf1N1B4_2754 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 87
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_09320 ATP-dependent DNA helicase RecG 0.47 AO353_13905 tRNA (uracil-5-)-methyltransferase 0.32 79
Pseudomonas simiae WCS417 0.55 PS417_27870 ATP-dependent DNA helicase RecG 0.48 PS417_24385 tRNA (uracil-5-)-methyltransferase 0.32 85
Pseudomonas fluorescens SBW25 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.47 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.60 74
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS29550 ATP-dependent DNA helicase RecG 0.47 PFLU_RS26305 tRNA (uridine(54)-C5)-methyltransferase TrmA 0.39 22
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4352 ATP-dependent DNA helicase RecG (EC 3.6.1.-) 0.48 Pf6N2E2_5063 tRNA (Uracil54-C5-)-methyltransferase (EC 2.1.1.35) low > 103
Pseudomonas sp. S08-1 0.54 OH686_13505 ATP-dependent DNA helicase RecG 0.47 OH686_16060 tRNA (uracil(54)-C(5))-methyltransferase low > 80
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_12380 ATP-dependent DNA helicase RecG 0.47 AO356_15600 tRNA (uracil-5-)-methyltransferase low > 104
Pseudomonas syringae pv. syringae B728a 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.47 Psyr_4287 tRNA (uracil-5-)-methyltransferase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.54 Psyr_0201 ATP-dependent DNA helicase RecG 0.47 Psyr_4287 tRNA (uracil-5-)-methyltransferase low > 86
Pseudomonas sp. RS175 0.54 PFR28_04435 ATP-dependent DNA helicase RecG 0.48 PFR28_03809 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 88
Acinetobacter radioresistens SK82 0.52 MPMX26_02732 ATP-dependent DNA helicase RecG 0.50 MPMX26_01714 tRNA/tmRNA (uracil-C(5))-methyltransferase low > 36
Dechlorosoma suillum PS 0.41 Dsui_0311 ATP-dependent DNA helicase RecG 0.44 Dsui_2239 tRNA (uracil-5-)-methyltransferase low > 51

Not shown: 51 genomes with orthologs for NOLOHH_07425 only; 0 genomes with orthologs for NOLOHH_05680 only