Conservation of cofitness between JDDGAC_28300 and JDDGAC_16085 in Escherichia coli ECRC98

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_16085 dsbD protein-disulfide reductase DsbD 0.56 19
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_10295 dsbD protein-disulfide reductase DsbD — —
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_15715 dsbD protein-disulfide reductase DsbD — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 MCAODC_02960 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_12450 dsbD protein-disulfide reductase DsbD low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 NOLOHH_04715 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 0.99 ECD_04006 thiol:disulfide interchange protein and activator of DsbC low > 61
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 BNILDI_06775 dsbD protein-disulfide reductase DsbD low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 0.99 b4136 dipZ thiol:disulfide interchange protein precursor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01628 Multidrug resistance protein MdtC 0.99 OHPLBJKB_03907 Thiol:disulfide interchange protein DsbD low > 73
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 HEPCGN_10675 dsbD protein-disulfide reductase DsbD low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.99 ECOLIN_RS24030 protein-disulfide reductase DsbD — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 0.99 EFB2_04399 Thiol:disulfide interchange protein DsbD low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.84 EX28DRAFT_3333 Thiol:disulfide interchange protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.82 MPMX20_00416 Thiol:disulfide interchange protein DsbD low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.87 GFF2016 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 78
Klebsiella michiganensis M5al 0.90 BWI76_RS19260 multidrug transporter subunit MdtC 0.80 BWI76_RS02315 protein-disulfide reductase DsbD low > 92
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.67 IAI46_01465 protein-disulfide reductase DsbD low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.65 HER17_RS18850 protein-disulfide reductase DsbD low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.64 IAI47_17335 protein-disulfide reductase DsbD low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.60 HGI48_RS02680 protein-disulfide reductase DsbD low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.61 DDA3937_RS02705 protein-disulfide reductase DsbD low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.60 DZA65_RS02835 protein-disulfide reductase DsbD 0.31 65
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.61 LU632_RS01840 protein-disulfide reductase DsbD low > 74
Ralstonia solanacearum PSI07 0.63 RPSI07_RS05520 nodulation protein 0.30 RPSI07_RS10195 protein-disulfide reductase DsbD low > 81
Ralstonia solanacearum GMI1000 0.63 RS_RS22920 nodulation protein 0.30 RS_RS14985 thiol:disulfide interchange protein DsbD — —
Ralstonia solanacearum UW163 0.63 UW163_RS21015 nodulation protein 0.30 UW163_RS06570 protein-disulfide reductase DsbD — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18115 nodulation protein 0.30 RALBFv3_RS07045 protein-disulfide reductase DsbD low > 76
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.30 ABZR87_RS02695 protein-disulfide reductase DsbD — —
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS07655 nodulation protein 0.30 HSERO_RS00715 thiol:disulfide interchange protein — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.27 AO353_19365 thiol:disulfide interchange protein low > 101
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.24 OH686_07580 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase — —
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.30 PfGW456L13_2298 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) low > 87
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.26 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.26 Psyr_4398 Protein-disulfide reductase — —
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.28 Psest_1603 Thiol:disulfide interchange protein low > 67
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.27 PFLU_RS21490 protein-disulfide reductase DsbD — —
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.27 PFLU_RS21490 protein-disulfide reductase DsbD — —
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.64 EX31_RS08975 protein-disulfide reductase DsbD low > 89
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.27 PP_4235 thiol/disulfide interchange protein 2 low > 96
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.27 PS417_19525 thiol:disulfide interchange protein — —
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14625 efflux RND transporter permease subunit 0.29 ABCV34_RS03205 protein-disulfide reductase DsbD low > 48
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.28 Pf6N2E2_2398 Cytochrome c-type biogenesis protein DsbD, protein-disulfide reductase (EC 1.8.1.8) — —
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.28 AO356_02870 thiol:disulfide interchange protein — —
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.29 PFR28_01029 Thiol:disulfide interchange protein DsbD — —
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.28 QEN71_RS28120 protein-disulfide reductase DsbD — —
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06491 multidrug efflux pump 0.28 H281DRAFT_05598 thiol:disulfide interchange protein DsbD — —
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07780 nodulation protein 0.28 BPHYT_RS17970 thiol:disulfide interchange protein — —

Not shown: 16 genomes with orthologs for JDDGAC_28300 only; 13 genomes with orthologs for JDDGAC_16085 only