Conservation of cofitness between JDDGAC_06150 and JDDGAC_09435 in Escherichia coli ECRC98

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_06150 dauA C4-dicarboxylic acid transporter DauA 1.0 JDDGAC_09435 cspD cold shock-like protein CspD 0.69 1
Escherichia coli ECRC102 1.00 NIAGMN_27810 dauA C4-dicarboxylic acid transporter DauA 1.00 NIAGMN_03840 cspD cold shock-like protein CspD — —
Escherichia coli BL21 1.00 ECD_01181 C4-dicarboxylic acid transporter 1.00 ECD_00885 inhibitor of DNA replication, cold shock protein-like protein — —
Escherichia coli ECRC99 1.00 KEDOAH_25420 dauA C4-dicarboxylic acid transporter DauA 1.00 KEDOAH_22110 cspD cold shock-like protein CspD — —
Escherichia coli ECRC62 1.00 BNILDI_18790 dauA C4-dicarboxylic acid transporter DauA 1.00 BNILDI_20450 cspD cold shock-like protein CspD low > 75
Escherichia coli ECRC100 1.00 OKFHMN_28425 dauA C4-dicarboxylic acid transporter DauA 1.00 OKFHMN_05800 cspD cold shock-like protein CspD low > 80
Escherichia coli ECRC101 1.00 MCAODC_21835 dauA C4-dicarboxylic acid transporter DauA 1.00 MCAODC_25015 cspD cold shock-like protein CspD low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02481 C4-dicarboxylic acid transporter DauA 1.00 OHPLBJKB_02788 Cold shock-like protein CspD — —
Escherichia coli BW25113 1.00 b1206 ychM orf, hypothetical protein (VIMSS) 1.00 b0880 cspD cold shock protein homolog (NCBI) low > 76
Escherichia coli Nissle 1917 1.00 ECOLIN_RS07295 C4-dicarboxylic acid transporter DauA 1.00 ECOLIN_RS04685 cold shock-like protein CspD — —
Escherichia fergusonii Becca 1.00 EFB2_02721 C4-dicarboxylic acid transporter DauA 1.00 EFB2_03181 Cold shock-like protein CspD low > 86
Escherichia coli ECOR27 1.00 NOLOHH_20635 dauA C4-dicarboxylic acid transporter DauA 1.00 NOLOHH_22195 cspD cold shock-like protein CspD low > 75
Escherichia coli ECOR38 1.00 HEPCGN_24890 dauA C4-dicarboxylic acid transporter DauA 1.00 HEPCGN_22885 cspD cold shock-like protein CspD low > 87
Klebsiella michiganensis M5al 0.92 BWI76_RS17465 C4-dicarboxylic acid transporter DauA 0.92 BWI76_RS09605 cold-shock protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2781 Putative sulfate permease 0.94 GFF4903 Cold shock protein CspD — —
Enterobacter sp. TBS_079 0.89 MPMX20_02641 C4-dicarboxylic acid transporter DauA 0.92 MPMX20_01542 Cold shock-like protein CspD low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_0825 high affinity sulphate transporter 1 0.92 EX28DRAFT_2052 cold shock domain protein CspD low > 76
Pectobacterium carotovorum WPP14 0.72 HER17_RS09730 C4-dicarboxylic acid transporter DauA 0.87 HER17_RS12410 cold shock-like protein CspD low > 75
Serratia liquefaciens MT49 0.70 IAI46_10305 C4-dicarboxylic acid transporter DauA 0.90 IAI46_08505 cold shock-like protein CspD low > 86
Rahnella sp. WP5 0.69 EX31_RS07290 C4-dicarboxylic acid transporter DauA 0.85 EX31_RS18570 cold shock-like protein CspD low > 89
Dickeya dadantii 3937 0.66 DDA3937_RS12220 C4-dicarboxylic acid transporter DauA 0.86 DDA3937_RS09550 cold shock-like protein CspD low > 74
Dickeya dianthicola 67-19 0.66 HGI48_RS12310 C4-dicarboxylic acid transporter DauA 0.86 HGI48_RS09565 cold shock-like protein CspD low > 71
Dickeya dianthicola ME23 0.66 DZA65_RS12750 C4-dicarboxylic acid transporter DauA 0.86 DZA65_RS09875 cold shock-like protein CspD low > 75
Shewanella oneidensis MR-1 0.56 SO3553 sulfate permease family protein (NCBI ptt file) 0.76 SO2628 cspD stress response protein CspD (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_3154 putative sulfate transporter YchM (RefSeq) 0.76 Shewana3_1751 cold-shock DNA-binding protein family protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.48 Sama_1067 putative sulfate transporter YchM (RefSeq) 0.76 Sama_2058 cold-shock DNA-binding domain-containing protein (RefSeq) low > 62
Shewanella loihica PV-4 0.40 Shew_0497 putative sulfate transporter YchM (RefSeq) 0.79 Shew_1564 cold-shock DNA-binding domain-containing protein (RefSeq) low > 60
Dechlorosoma suillum PS 0.33 Dsui_1250 sulfate permease-like transporter, MFS superfamily 0.61 Dsui_0007 cold shock protein low > 51
Vibrio cholerae E7946 ATCC 55056 0.33 CSW01_14410 sodium-independent anion transporter 0.77 CSW01_05795 cold-shock protein CspD low > 62
Cupriavidus basilensis FW507-4G11 0.30 RR42_RS16025 sulfate transporter 0.59 RR42_RS20855 cold-shock protein low > 128
Castellaniella sp019104865 MT123 0.28 ABCV34_RS08985 SulP family inorganic anion transporter 0.61 ABCV34_RS05315 cold-shock protein low > 48
Paraburkholderia bryophila 376MFSha3.1 0.19 H281DRAFT_01715 sulfate permease, SulP family 0.62 H281DRAFT_04084 cold-shock DNA-binding protein family — —
Alteromonas macleodii MIT1002 0.18 MIT1002_01122 Bicarbonate transporter BicA 0.68 MIT1002_01832 Cold shock-like protein CspD low > 70
Pseudomonas fluorescens GW456-L13 0.16 PfGW456L13_643 Sulfate permease 0.61 PfGW456L13_2644 Cold shock protein CspD low > 87
Burkholderia phytofirmans PsJN 0.15 BPHYT_RS22120 sulfate transporter 0.62 BPHYT_RS15720 cold-shock protein — —
Pantoea sp. MT58 0.15 IAI47_21130 SulP family inorganic anion transporter 0.86 IAI47_12955 cold shock-like protein CspD low > 76
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS01545 sulfate transporter 0.65 HSERO_RS07020 cold-shock protein — —
Pseudomonas putida KT2440 0.14 PP_4112 Sulphate transporter 0.62 PP_4010 DNA replication inhibitor low > 96
Paraburkholderia sabiae LMG 24235 0.14 QEN71_RS12990 SulP family inorganic anion transporter 0.63 QEN71_RS02995 cold shock domain-containing protein CspD low > 153
Paraburkholderia graminis OAS925 0.13 ABIE53_001581 MFS superfamily sulfate permease-like transporter 0.62 ABIE53_003308 CspA family cold shock protein — —
Xanthomonas campestris pv. campestris strain 8004 0.13 Xcc-8004.821.1 Sulfate permease 0.61 Xcc-8004.3660.1 Cold shock protein CspD low > 74

Not shown: 48 genomes with orthologs for JDDGAC_06150 only; 6 genomes with orthologs for JDDGAC_09435 only