Conservation of cofitness between JDDGAC_28300 and JDDGAC_07315 in Escherichia coli ECRC98

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_28300 mdtC multidrug efflux RND transporter permease subunit MdtC 1.0 JDDGAC_07315 flgF flagellar basal-body rod protein FlgF 0.63 4
Escherichia coli ECRC99 1.00 KEDOAH_03960 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 KEDOAH_24100 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC102 1.00 NIAGMN_22135 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 NIAGMN_24175 flgF flagellar basal-body rod protein FlgF — —
Escherichia coli ECRC101 1.00 MCAODC_20750 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 MCAODC_23015 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli ECRC100 1.00 OKFHMN_24190 mdtC multidrug efflux RND transporter permease subunit MdtC 1.00 OKFHMN_03655 flgF flagellar basal-body rod protein FlgF low > 80
Escherichia coli ECOR27 1.00 NOLOHH_15535 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 NOLOHH_21185 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli BL21 1.00 ECD_01981 multidrug efflux system, subunit C 1.00 ECD_01073 flagellar component of cell-proximal portion of basal-body rod — —
Escherichia coli ECRC62 1.00 BNILDI_14450 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 BNILDI_19345 flgF flagellar basal-body rod protein FlgF low > 75
Escherichia coli BW25113 0.99 b2076 mdtC multidrug efflux system, subunit C (NCBI) 1.00 b1077 flgF flagellar component of cell-proximal portion of basal-body rod (NCBI) low > 76
Escherichia coli ECOR38 0.99 HEPCGN_02880 mdtC multidrug efflux RND transporter permease subunit MdtC 0.99 HEPCGN_23835 flgF flagellar basal-body rod protein FlgF low > 87
Escherichia coli Nissle 1917 0.99 ECOLIN_RS12205 multidrug efflux RND transporter permease subunit MdtC 0.99 ECOLIN_RS06235 flagellar basal-body rod protein FlgF — —
Escherichia fergusonii Becca 0.99 EFB2_01779 Multidrug resistance protein MdtC 0.99 EFB2_02897 Flagellar basal-body rod protein FlgF low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_0482 Cation/multidrug efflux pump 0.91 EX28DRAFT_1855 flagellar hook-basal body protein low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_03062 Multidrug resistance protein MdtC 0.90 MPMX20_01756 Flagellar basal-body rod protein FlgF low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.90 GFF3853 Multidrug transporter MdtC 0.88 GFF3358 Flagellar basal-body rod protein FlgF low > 78
Serratia liquefaciens MT49 0.82 IAI46_18980 multidrug efflux RND transporter permease subunit MdtC 0.73 IAI46_15940 flagellar basal body rod protein FlgF low > 86
Pectobacterium carotovorum WPP14 0.79 HER17_RS06315 multidrug efflux RND transporter permease subunit MdtC 0.72 HER17_RS08185 flagellar basal body rod protein FlgF low > 75
Pantoea sp. MT58 0.79 IAI47_06865 multidrug efflux RND transporter permease subunit MdtC 0.77 IAI47_12145 flagellar basal body rod protein FlgF low > 76
Dickeya dianthicola 67-19 0.78 HGI48_RS15350 multidrug efflux RND transporter permease subunit MdtC 0.70 HGI48_RS13505 flagellar basal body rod protein FlgF low > 71
Dickeya dadantii 3937 0.78 DDA3937_RS15270 multidrug efflux RND transporter permease subunit MdtC 0.71 DDA3937_RS13460 flagellar basal body rod protein FlgF low > 74
Dickeya dianthicola ME23 0.78 DZA65_RS16170 multidrug efflux RND transporter permease subunit MdtC 0.71 DZA65_RS13990 flagellar basal body rod protein FlgF low > 75
Erwinia tracheiphila SCR3 0.73 LU632_RS08685 mdtC multidrug efflux RND transporter permease subunit MdtC 0.81 LU632_RS10415 flagellar basal body rod protein FlgF low > 74
Ralstonia solanacearum PSI07 0.63 RPSI07_RS05520 nodulation protein 0.39 RPSI07_RS01410 flagellar basal-body rod protein FlgF low > 81
Ralstonia solanacearum GMI1000 0.63 RS_RS22920 nodulation protein 0.39 RS_RS18815 flagellar basal-body rod protein FlgF low > 80
Ralstonia solanacearum UW163 0.63 UW163_RS21015 nodulation protein 0.40 UW163_RS17465 flagellar basal-body rod protein FlgF — —
Ralstonia solanacearum IBSBF1503 0.63 RALBFv3_RS18115 nodulation protein 0.40 RALBFv3_RS21720 flagellar basal-body rod protein FlgF low > 76
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS19020 multidrug efflux RND transporter permease subunit 0.36 ABZR87_RS22270 flagellar basal-body rod protein FlgF low > 80
Herbaspirillum seropedicae SmR1 0.61 HSERO_RS07655 nodulation protein 0.47 HSERO_RS10200 flagellar basal body rod protein FlgF low > 78
Acidovorax sp. GW101-3H11 0.56 Ac3H11_3620 Cobalt-zinc-cadmium resistance protein CzcA; Cation efflux system protein CusA 0.38 Ac3H11_1373 Flagellar basal-body rod protein FlgF low > 79
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_22900 acriflavine resistance protein B 0.33 AO353_18595 flagellar biosynthesis protein FlgF low > 101
Pseudomonas sp. S08-1 0.55 OH686_00930 Multidrug efflux system MdtABC-TolC, inner-membrane proton/drug antiporter MdtC (RND type) 0.38 OH686_02955 Flagellar basal-body rod protein FlgF low > 80
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_3265 Acriflavin resistance plasma membrane protein 0.34 PfGW456L13_4387 Flagellar basal-body rod protein FlgF low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_2484 Acriflavin resistance protein 0.35 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_2484 Acriflavin resistance protein 0.35 Psyr_3476 Flagellar basal body rod protein:Protein of unknown function DUF1078 low > 86
Pseudomonas stutzeri RCH2 0.53 Psest_2140 Cation/multidrug efflux pump 0.38 Psest_2964 flagellar basal-body rod protein FlgF low > 67
Pseudomonas fluorescens SBW25 0.53 PFLU_RS13435 MMPL family transporter 0.35 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS13435 MMPL family transporter 0.35 PFLU_RS21860 flagellar basal body rod protein FlgF low > 109
Rahnella sp. WP5 0.53 EX31_RS13375 MMPL family transporter 0.68 EX31_RS11295 flagellar basal body rod protein FlgF low > 89
Pseudomonas simiae WCS417 0.52 PS417_12750 acriflavine resistance protein B 0.35 PS417_19890 flagellar basal body rod protein FlgF — —
Pseudomonas putida KT2440 0.52 PP_3583 multidrug efflux transport system - membrane subunit 0.34 PP_4386 flagellar basal-body rod protein FlgF low > 96
Castellaniella sp019104865 MT123 0.52 ABCV34_RS14625 efflux RND transporter permease subunit 0.39 ABCV34_RS05750 flagellar basal-body rod protein FlgF low > 48
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_1271 Acriflavin resistance plasma membrane protein 0.32 Pf6N2E2_2628 Flagellar basal-body rod protein FlgF low > 103
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_25880 acriflavine resistance protein B 0.32 AO356_03930 flagellar biosynthesis protein FlgF low > 104
Pseudomonas sp. RS175 0.51 PFR28_02193 Multidrug resistance protein MdtC 0.33 PFR28_00804 Flagellar basal-body rod protein FlgF low > 88
Paraburkholderia sabiae LMG 24235 0.47 QEN71_RS29845 efflux RND transporter permease subunit 0.44 QEN71_RS28900 flagellar basal-body rod protein FlgF low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF488 RND multidrug efflux transporter; Acriflavin resistance protein 0.39 GFF1411 Flagellar basal-body rod protein FlgF low > 90
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_06491 multidrug efflux pump 0.48 H281DRAFT_05766 flagellar basal-body rod protein FlgF low > 103
Burkholderia phytofirmans PsJN 0.43 BPHYT_RS07780 nodulation protein 0.49 BPHYT_RS18875 flagellar basal body rod protein FlgF low > 109

Not shown: 16 genomes with orthologs for JDDGAC_28300 only; 19 genomes with orthologs for JDDGAC_07315 only