Conservation of cofitness between JDDGAC_01495 and JDDGAC_00390 in Escherichia coli ECRC98

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_01495 astB N-succinylarginine dihydrolase 1.0 JDDGAC_00390 tcyL cystine ABC transporter permease 0.66 16
Escherichia coli ECRC99 1.00 KEDOAH_01190 astB N-succinylarginine dihydrolase 1.00 KEDOAH_02290 tcyL cystine ABC transporter permease
Escherichia coli ECRC101 1.00 MCAODC_18490 astB N-succinylarginine dihydrolase 1.00 MCAODC_19590 tcyL cystine ABC transporter permease low > 87
Escherichia coli ECRC102 1.00 NIAGMN_01145 astB N-succinylarginine dihydrolase 1.00 NIAGMN_02250 tcyL cystine ABC transporter permease
Escherichia coli ECRC100 1.00 OKFHMN_26920 astB N-succinylarginine dihydrolase 1.00 OKFHMN_25800 tcyL cystine ABC transporter permease low > 80
Escherichia coli BW25113 0.99 b1745 astB succinylarginine dihydrolase (NCBI) 1.00 b1918 yecS predicted transporter subunit: membrane component of ABC superfamily (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01987 N-succinylarginine dihydrolase 1.00 OHPLBJKB_01811 L-cystine transport system permease protein YecS low > 73
Escherichia coli ECOR27 0.98 NOLOHH_17435 astB N-succinylarginine dihydrolase 1.00 NOLOHH_16420 tcyL cystine ABC transporter permease low > 75
Escherichia coli ECRC62 0.98 BNILDI_16220 astB N-succinylarginine dihydrolase 1.00 BNILDI_15210 tcyL cystine ABC transporter permease low > 75
Escherichia coli ECOR38 0.98 HEPCGN_05285 astB N-succinylarginine dihydrolase 1.00 HEPCGN_04155 tcyL cystine ABC transporter permease low > 87
Escherichia coli Nissle 1917 0.96 ECOLIN_RS09730 N-succinylarginine dihydrolase 1.00 ECOLIN_RS10925 cystine ABC transporter permease
Escherichia fergusonii Becca 0.96 EFB2_02248 N-succinylarginine dihydrolase 1.00 EFB2_02028 L-cystine transport system permease protein YecS low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.86 GFF3495 Succinylarginine dihydrolase (EC 3.5.3.23) 0.96 GFF1694 Cystine ABC transporter, permease protein low > 78
Enterobacter asburiae PDN3 0.79 EX28DRAFT_1749 succinylarginine dihydrolase (EC 3.5.3.23) 0.95 EX28DRAFT_0629 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_01868 N-succinylarginine dihydrolase 0.95 MPMX20_02843 L-cystine transport system permease protein YecS low > 85
Klebsiella michiganensis M5al 0.74 BWI76_RS11685 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.94 BWI76_RS18355 amino acid ABC transporter permease low > 92
Pantoea sp. MT58 0.71 IAI47_11080 N-succinylarginine dihydrolase 0.87 IAI47_08180 cystine ABC transporter permease low > 76
Serratia liquefaciens MT49 0.68 IAI46_15320 N-succinylarginine dihydrolase 0.75 IAI46_15765 cystine ABC transporter permease low > 86
Rahnella sp. WP5 0.60 EX31_RS17395 N-succinylarginine dihydrolase 0.86 EX31_RS09430 cystine ABC transporter permease low > 89
Pseudomonas putida KT2440 0.59 PP_4477 N-succinylarginine dihydrolase 0.76 PP_0226 sulfur compound ABC transporter - permease subunit low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_3561 succinylarginine dihydrolase 0.70 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein low > 86
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_3561 succinylarginine dihydrolase 0.70 Psyr_0357 Diaminopimelate ABC transporter membrane protein / L-cystine ABC transporter membrane protein low > 86
Pseudomonas sp. S08-1 0.57 OH686_21310 succinylarginine dihydrolase 0.66 OH686_18900 L-cystine ABC transporter (wide substrate range), permease protein YecS low > 80
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_03005 succinylarginine dihydrolase 0.76 AO353_11670 amino acid ABC transporter permease low > 101
Pseudomonas simiae WCS417 0.56 PS417_21690 N-succinylarginine dihydrolase 0.67 PS417_01100 amino acid ABC transporter permease low > 88
Paraburkholderia graminis OAS925 0.56 ABIE53_001773 succinylarginine dihydrolase 0.48 ABIE53_002869 cystine transport system permease protein
Pseudomonas sp. RS175 0.56 PFR28_03279 N-succinylarginine dihydrolase 0.68 PFR28_04854 L-cystine transport system permease protein YecS low > 88
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_06482 succinylarginine dihydrolase 0.49 H281DRAFT_00383 amino acid ABC transporter membrane protein, PAAT family
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_18745 succinylarginine dihydrolase 0.69 AO356_10240 amino acid ABC transporter permease low > 104
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_1975 Succinylarginine dihydrolase (EC 3.5.3.23) 0.75 PfGW456L13_445 Cystine ABC transporter, permease protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_3445 Succinylarginine dihydrolase (EC 3.5.3.23) 0.76 Pf1N1B4_1694 Cystine ABC transporter, permease protein low > 87
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS23355 N-succinylarginine dihydrolase 0.49 QEN71_RS05415 amino acid ABC transporter permease
Pseudomonas fluorescens SBW25 0.55 PFLU_RS23295 N-succinylarginine dihydrolase 0.74 PFLU_RS01210 cystine ABC transporter permease low > 109
Pseudomonas fluorescens SBW25-INTG 0.55 PFLU_RS23295 N-succinylarginine dihydrolase 0.74 PFLU_RS01210 cystine ABC transporter permease low > 109
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS07715 N-succinylarginine dihydrolase 0.48 BPHYT_RS13290 cysteine ABC transporter permease
Pseudomonas fluorescens FW300-N2E2 0.55 Pf6N2E2_5669 Succinylarginine dihydrolase (EC 3.5.3.23) 0.69 Pf6N2E2_3920 Cystine ABC transporter, permease protein low > 103
Shewanella loihica PV-4 0.54 Shew_2225 succinylarginine dihydrolase (RefSeq) 0.31 Shew_3165 polar amino acid ABC transporter, inner membrane subunit (RefSeq) low > 60
Shewanella sp. ANA-3 0.54 Shewana3_1728 Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.31 Shewana3_0881 polar amino acid ABC transporter, inner membrane subunit (RefSeq) low > 73
Shewanella oneidensis MR-1 0.53 SO2706 astB Succinylarginine dihydrolase (EC 3.5.3.23) (from data) 0.31 SO1043 amino acid ABC transporter, permease protein (NCBI ptt file) low > 76
Caulobacter crescentus NA1000 0.43 CCNA_01680 succinylarginine dihydrolase 0.63 CCNA_01507 cystine transport system permease protein low > 66
Caulobacter crescentus NA1000 Δfur 0.43 CCNA_01680 succinylarginine dihydrolase 0.63 CCNA_01507 cystine transport system permease protein low > 67

Not shown: 8 genomes with orthologs for JDDGAC_01495 only; 28 genomes with orthologs for JDDGAC_00390 only