Conservation of cofitness between IAI46_03280 and IAI46_24640 in Serratia liquefaciens MT49

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_03280 DNA polymerase II 1.0 IAI46_24640 sulfate ABC transporter substrate-binding protein 0.93 1
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS09335 DNA polymerase II 0.63 RR42_RS12295 ABC transporter permease low > 128
Pseudomonas syringae pv. syringae B728a 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.61 Psyr_0084 extracellular solute-binding protein, family 1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.79 Psyr_2361 DNA damage-inducible DNA polymerase II 0.61 Psyr_0084 extracellular solute-binding protein, family 1 low > 86
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_01369 DNA damage-inducible DNA polymerase II 0.64 H281DRAFT_00778 sulfate transport system substrate-binding protein low > 103
Paraburkholderia graminis OAS925 0.79 ABIE53_004018 DNA polymerase-2 0.65 ABIE53_001990 sulfate/thiosulfate-binding protein low > 113
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS23105 DNA polymerase 0.64 BPHYT_RS08790 ABC transporter permease low > 109
Pseudomonas sp. RS175 0.77 PFR28_01299 DNA polymerase II 0.61 PFR28_04762 Sulfate-binding protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.77 Pf6N2E2_2137 DNA polymerase II (EC 2.7.7.7) 0.60 Pf6N2E2_4006 Sulfate and thiosulfate binding protein CysP low > 103
Pseudomonas fluorescens FW300-N1B4 0.77 Pf1N1B4_87 DNA polymerase II (EC 2.7.7.7) 0.61 Pf1N1B4_1727 Sulfate and thiosulfate binding protein CysP low > 87
Pseudomonas fluorescens GW456-L13 0.77 PfGW456L13_2472 DNA polymerase II (EC 2.7.7.7) 0.62 PfGW456L13_486 Sulfate and thiosulfate binding protein CysP low > 87
Pseudomonas fluorescens FW300-N2E3 0.77 AO353_29350 DNA polymerase II 0.61 AO353_11540 ABC transporter permease low > 101
Paraburkholderia sabiae LMG 24235 0.77 QEN71_RS13385 DNA polymerase II 0.65 QEN71_RS22590 sulfate ABC transporter substrate-binding protein low > 153
Pseudomonas fluorescens FW300-N2C3 0.77 AO356_01325 DNA polymerase II 0.61 AO356_10685 ABC transporter permease low > 104
Rahnella sp. WP5 0.77 EX31_RS03740 DNA polymerase II 0.83 EX31_RS14305 sulfate ABC transporter substrate-binding protein low > 89
Pseudomonas stutzeri RCH2 0.76 Psest_1519 DNA polymerase elongation subunit (family B) 0.62 Psest_4060 sulfate/thiosulfate-binding protein low > 67
Pectobacterium carotovorum WPP14 0.75 HER17_RS02995 DNA polymerase II 0.60 HER17_RS05670 sulfate ABC transporter substrate-binding protein 0.51 69
Pseudomonas simiae WCS417 0.74 PS417_09565 DNA polymerase II 0.61 PS417_00930 ABC transporter permease low > 88
Pseudomonas sp. S08-1 0.74 OH686_16850 DNA polymerase II 0.61 OH686_11670 Sulfate and thiosulfate binding protein CysP low > 80
Pseudomonas fluorescens SBW25 0.73 PFLU_RS10185 DNA polymerase II 0.61 PFLU_RS00945 sulfate ABC transporter substrate-binding protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.73 PFLU_RS10185 DNA polymerase II 0.61 PFLU_RS00945 sulfate ABC transporter substrate-binding protein low > 109
Dickeya dianthicola 67-19 0.73 HGI48_RS18165 DNA polymerase II 0.62 HGI48_RS15990 sulfate ABC transporter substrate-binding protein low > 71
Dickeya dianthicola ME23 0.73 DZA65_RS19305 DNA polymerase II 0.62 DZA65_RS17075 sulfate ABC transporter substrate-binding protein low > 75
Dickeya dadantii 3937 0.73 DDA3937_RS18230 DNA polymerase II 0.62 DDA3937_RS15850 sulfate ABC transporter substrate-binding protein low > 74
Pseudomonas putida KT2440 0.73 PP_2393 DNA polymerase II 0.60 PP_5171 sulfate ABC transporter low > 96
Erwinia tracheiphila SCR3 0.72 LU632_RS02810 polB DNA polymerase II 0.78 LU632_RS21830 sulfate ABC transporter substrate-binding protein low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF182 DNA polymerase II (EC 2.7.7.7) 0.86 GFF2284 Sulfate-binding protein Sbp low > 78
Pantoea sp. MT58 0.71 IAI47_16050 DNA polymerase II 0.79 IAI47_00785 sulfate ABC transporter substrate-binding protein low > 76
Escherichia coli BL21 0.71 ECD_00062 DNA polymerase II 0.87 ECD_03802 sulfate transporter subunit low > 60
Escherichia coli ECOR38 0.71 HEPCGN_08785 polB DNA polymerase II 0.87 HEPCGN_12465 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 85
Escherichia coli BW25113 0.71 b0060 polB DNA polymerase II (NCBI) 0.87 b3917 sbp sulfate transporter subunit (NCBI) low > 76
Enterobacter sp. TBS_079 0.71 MPMX20_00754 DNA polymerase II 0.85 MPMX20_04551 Sulfate-binding protein low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.71 OHPLBJKB_03598 DNA polymerase II 0.87 OHPLBJKB_04134 Sulfate-binding protein low > 73
Escherichia coli ECRC101 0.71 MCAODC_01310 polB DNA polymerase II 0.87 MCAODC_04320 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC102 0.71 NIAGMN_08645 polB DNA polymerase II 0.87 NIAGMN_11575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC98 0.71 JDDGAC_14390 polB DNA polymerase II 0.87 JDDGAC_17445 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC101 0.71 OKFHMN_10795 polB DNA polymerase II 0.87 OKFHMN_13820 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECRC99 0.71 KEDOAH_17360 polB DNA polymerase II 0.87 KEDOAH_14340 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia fergusonii Becca 0.71 EFB2_03985 DNA polymerase II 0.88 EFB2_04701 Sulfate-binding protein low > 86
Escherichia coli ECRC62 0.71 BNILDI_08465 polB DNA polymerase II 0.87 BNILDI_05575 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp — —
Escherichia coli ECOR27 0.71 NOLOHH_03140 polB DNA polymerase II 0.87 NOLOHH_05955 sbp sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 57
Escherichia coli Nissle 1917 0.71 ECOLIN_RS00320 DNA polymerase II 0.87 ECOLIN_RS22565 sulfate/thiosulfate ABC transporter substrate-binding protein Sbp low > 52
Enterobacter asburiae PDN3 0.70 EX28DRAFT_3652 DNA polymerase elongation subunit (family B) 0.85 EX28DRAFT_4391 sulfate/thiosulfate-binding protein low > 76
Klebsiella michiganensis M5al 0.69 BWI76_RS04575 DNA polymerase II 0.83 BWI76_RS27500 sulfate transporter subunit low > 92
Herbaspirillum seropedicae SmR1 0.67 HSERO_RS12200 DNA polymerase II 0.66 HSERO_RS08185 sulfate transporter subunit low > 78
Variovorax sp. SCN45 0.58 GFF7213 DNA polymerase II (EC 2.7.7.7) 0.60 GFF1247 Sulfate and thiosulfate binding protein CysP low > 127
Shewanella oneidensis MR-1 0.38 SO1820 polB DNA polymerase II (NCBI ptt file) 0.63 SO4652 sbp sulfate ABC transporter, periplasmic sulfate-binding protein (NCBI ptt file) low > 76

Not shown: 7 genomes with orthologs for IAI46_03280 only; 27 genomes with orthologs for IAI46_24640 only