Conservation of cofitness between IAI46_01315 and IAI46_17585 in Serratia liquefaciens MT49

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Serratia liquefaciens MT49 1.0 IAI46_01315 thiamine phosphate synthase 1.0 IAI46_17585 gluconate 5-dehydrogenase 0.49 12
Rahnella sp. WP5 0.77 EX31_RS16810 thiamine phosphate synthase 0.82 EX31_RS19175 gluconate 5-dehydrogenase low > 89
Dickeya dadantii 3937 0.75 DDA3937_RS01170 thiamine phosphate synthase 0.37 DDA3937_RS11335 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 74
Enterobacter sp. TBS_079 0.73 MPMX20_00216 Thiamine-phosphate synthase 0.37 MPMX20_01886 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.73 GFF4199 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.77 GFF954 5-keto-D-gluconate 5-reductase (EC 1.1.1.69) low > 78
Klebsiella michiganensis M5al 0.73 BWI76_RS01550 thiamine phosphate synthase 0.71 BWI76_RS06140 gluconate 5-dehydrogenase low > 92
Escherichia coli ECRC99 0.73 KEDOAH_14780 thiE thiamine phosphate synthase 0.38 KEDOAH_07815 ygcW Uncharacterized oxidoreductase YgcW — —
Escherichia coli ECRC101 0.73 MCAODC_03880 thiE thiamine phosphate synthase 0.38 MCAODC_10840 ygcW Uncharacterized oxidoreductase YgcW — —
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4535 thiamine-phosphate diphosphorylase 0.36 EX28DRAFT_2921 2-deoxy-D-gluconate 3-dehydrogenase low > 76
Escherichia coli ECRC98 0.73 JDDGAC_17005 thiE thiamine phosphate synthase 0.38 JDDGAC_23980 ygcW Uncharacterized oxidoreductase YgcW — —
Escherichia fergusonii Becca 0.73 EFB2_04618 Thiamine-phosphate synthase 0.77 EFB2_04269 5-keto-D-gluconate 5-reductase low > 86
Escherichia coli ECRC102 0.73 NIAGMN_11130 thiE thiamine phosphate synthase 0.38 NIAGMN_18085 ygcW Uncharacterized oxidoreductase YgcW — —
Escherichia coli ECRC101 0.72 OKFHMN_13380 thiE thiamine phosphate synthase 0.38 OKFHMN_20315 ygcW Uncharacterized oxidoreductase YgcW — —
Escherichia coli Nissle 1917 0.72 ECOLIN_RS23035 thiamine phosphate synthase 0.46 ECOLIN_RS01525 gluconate 5-dehydrogenase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.72 OHPLBJKB_04057 Thiamine-phosphate synthase 0.77 OHPLBJKB_03770 5-keto-D-gluconate 5-reductase low > 73
Escherichia coli ECOR38 0.72 HEPCGN_12015 thiE thiamine phosphate synthase 0.78 HEPCGN_09950 idnO gluconate 5-dehydrogenase low > 85
Escherichia coli BL21 0.72 ECD_03870 thiamine phosphate synthase (thiamine phosphate pyrophosphorylase) 0.77 ECD_04132 5-keto-D-gluconate-5-reductase low > 60
Escherichia coli BW25113 0.72 b3993 thiE thiamine-phosphate pyrophosphorylase (NCBI) 0.77 b4266 idnO gluconate 5-dehydrogenase (NCBI) low > 76
Escherichia coli ECRC62 0.72 BNILDI_06000 thiE thiamine phosphate synthase 0.38 BNILDI_10690 ygcW Uncharacterized oxidoreductase YgcW — —
Escherichia coli ECOR27 0.72 NOLOHH_05525 thiE thiamine phosphate synthase 0.77 NOLOHH_04025 idnO gluconate 5-dehydrogenase low > 57
Dickeya dianthicola ME23 0.71 DZA65_RS01210 thiamine phosphate synthase 0.37 DZA65_RS11720 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 75
Pantoea sp. MT58 0.71 IAI47_18090 thiamine phosphate synthase 0.37 IAI47_11020 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 76
Erwinia tracheiphila SCR3 0.68 LU632_RS00965 thiE thiamine phosphate synthase 0.36 LU632_RS00615 kduD 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD low > 74
Dinoroseobacter shibae DFL-12 0.40 Dshi_0911 Thiamine-phosphate diphosphorylase (RefSeq) 0.29 Dshi_0553 short-chain dehydrogenase/reductase SDR (RefSeq) low > 64
Bosea sp. OAE506 0.38 ABIE41_RS20180 thiamine phosphate synthase 0.57 ABIE41_RS09610 SDR family NAD(P)-dependent oxidoreductase — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c09050 thiamine-phosphate pyrophosphorylase ThiE 0.31 PGA1_c27390 short-chain dehydrogenase/reductase low > 62
Sinorhizobium meliloti 1021 0.35 SM_b20618 thiamine-phosphate pyrophosphorylase 0.48 SMa0513 gluconate 5-dehydrogenase low > 103
Lysobacter sp. OAE881 0.19 ABIE51_RS17410 thiamine phosphate synthase 0.34 ABIE51_RS02825 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —
Phocaeicola vulgatus CL09T03C04 0.19 HMPREF1058_RS03290 thiamine phosphate synthase 0.45 HMPREF1058_RS11050 gluconate 5-dehydrogenase low > 67
Mycobacterium tuberculosis H37Rv 0.19 Rv0414c Thiamine-phosphate pyrophosphorylase ThiE (TMP pyrophosphorylase) (TMP-PPASE) (thiamine-phosphate synthase) 0.29 Rv1928c Probable short-chain type dehydrogenase/reductase — —
Pseudomonas sp. RS175 0.18 PFR28_03844 Thiamine-phosphate synthase 0.32 PFR28_02545 3-oxoacyl-[acyl-carrier-protein] reductase FabG low > 88
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS20175 thiamine-phosphate diphosphorylase 0.35 CA265_RS00760 2-deoxy-D-gluconate 3-dehydrogenase low > 88
Rhizobium sp. OAE497 0.18 ABIE40_RS25925 thiamine phosphate synthase 0.55 ABIE40_RS19680 SDR family oxidoreductase low > 107
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS17750 thiamine phosphate synthase 0.45 ABI39_RS05980 gluconate 5-dehydrogenase low > 72
Pseudomonas fluorescens FW300-N2E2 0.18 Pf6N2E2_5023 Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) 0.32 Pf6N2E2_383 3-oxoacyl-[acyl-carrier protein] reductase (EC 1.1.1.100) low > 103
Caulobacter crescentus NA1000 Δfur 0.17 CCNA_03373 thiamin-phosphate pyrophosphorylase 0.31 CCNA_01559 2-deoxy-D-gluconate 3-dehydrogenase — —
Caulobacter crescentus NA1000 0.17 CCNA_03373 thiamin-phosphate pyrophosphorylase 0.31 CCNA_01559 2-deoxy-D-gluconate 3-dehydrogenase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.17 A4249_RS08810 thiamine phosphate synthase 0.36 A4249_RS07665 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase KduD — —
Pseudomonas fluorescens FW300-N2C3 0.17 AO356_15430 thiamine-phosphate pyrophosphorylase 0.32 AO356_22455 oxidoreductase low > 104
Pseudomonas stutzeri RCH2 0.16 Psest_0536 thiamine-phosphate pyrophosphorylase 0.31 Psest_0357 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) low > 67
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS02140 thiamine-phosphate synthase 0.56 HSERO_RS05480 gluconate 5-dehydrogenase low > 78
Bacteroides thetaiotaomicron VPI-5482 0.16 BT0652 putative thiamine-phosphate pyrophosphorylase (NCBI ptt file) 0.46 BT3232 gluconate 5-dehydrogenase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.15 BACOVA_02360 thiamine-phosphate diphosphorylase 0.45 BACOVA_00141 oxidoreductase, short chain dehydrogenase/reductase family protein low > 94
Bacteroides stercoris CC31F 0.13 HMPREF1181_RS14675 thiamine phosphate synthase 0.46 HMPREF1181_RS01625 gluconate 5-dehydrogenase low > 56

Not shown: 33 genomes with orthologs for IAI46_01315 only; 14 genomes with orthologs for IAI46_17585 only