| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Herbaspirillum seropedicae SmR1 | 1.0 | HSERO_RS11175 | | multidrug DMT transporter permease | 1.0 | HSERO_RS19265 | | LysR family transcriptional regulator | 0.31 | 17 |
| Cupriavidus basilensis FW507-4G11 | 0.42 | RR42_RS09065 | | multidrug DMT transporter permease | 0.57 | RR42_RS02565 | | LysR family transcriptional regulator | low | > 128 |
| Pseudomonas simiae WCS417 | 0.31 | PS417_24455 | | membrane protein | 0.32 | PS417_28125 | | LysR family transcriptional regulator | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.30 | PfGW456L13_1422 | | membrane protein, putative | 0.32 | PfGW456L13_743 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.30 | PFLU_RS26380 | | DMT family transporter | 0.32 | PFLU_RS29810 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas sp. RS175 | 0.30 | PFR28_03816 | | Riboflavin transporter | 0.32 | PFR28_04497 | | HTH-type transcriptional regulator YjiE | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.30 | PFLU_RS26380 | | DMT family transporter | 0.32 | PFLU_RS29810 | | LysR family transcriptional regulator | low | > 109 |
| Pseudomonas fluorescens FW300-N2E2 | 0.29 | Pf6N2E2_5055 | | membrane protein, putative | 0.36 | Pf6N2E2_2250 | | Transcriptional regulator | 0.16 | 75 |
| Pseudomonas fluorescens FW300-N1B4 | 0.29 | Pf1N1B4_2745 | | membrane protein, putative | 0.32 | Pf1N1B4_2026 | | Transcriptional regulator | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.29 | AO356_15570 | | hypothetical protein | 0.36 | AO356_01910 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas syringae pv. syringae B728a | 0.28 | Psyr_2128 | | Protein of unknown function DUF6 | 0.31 | Psyr_5050 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.28 | Psyr_2128 | | Protein of unknown function DUF6 | 0.31 | Psyr_5050 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas fluorescens FW300-N2E3 | 0.28 | AO353_06205 | | hypothetical protein | 0.32 | AO353_09945 | | LysR family transcriptional regulator | low | > 101 |
| Bosea sp. OAE506 | 0.27 | ABIE41_RS08450 | | DMT family transporter | 0.23 | ABIE41_RS16420 | | LysR family transcriptional regulator | low | > 77 |
| Variovorax sp. OAS795 | 0.27 | ABID97_RS22600 | | DMT family transporter | 0.53 | ABID97_RS05925 | | LysR substrate-binding domain-containing protein | low | > 91 |
| Sphingomonas koreensis DSMZ 15582 | 0.26 | Ga0059261_0746 | | Predicted permease, DMT superfamily | 0.31 | Ga0059261_2946 | | Transcriptional regulator | low | > 68 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.26 | GFF113 | | Membrane protein, putative | 0.55 | GFF518 | | Transcriptional regulator | low | > 90 |
| Variovorax sp. SCN45 | 0.25 | GFF5790 | | putative membrane protein | 0.54 | GFF4595 | | Transcriptional regulator | low | > 127 |
| Azospirillum sp. SherDot2 | 0.25 | MPMX19_05794 | | Riboflavin transporter | 0.27 | MPMX19_05675 | | HTH-type transcriptional regulator YjiE | low | > 112 |
| Pseudomonas putida KT2440 | 0.25 | PP_3670 | | putative permease of the drug/metabolite transporter superfamily | 0.32 | PP_5337 | | LysR family transcriptional regulator | low | > 96 |
| Azospirillum brasilense Sp245 | 0.25 | AZOBR_RS29865 | | DMT transporter permease | 0.23 | AZOBR_RS17550 | | LysR family transcriptional regulator | low | > 97 |
| Pseudomonas stutzeri RCH2 | 0.23 | Psest_0550 | | Predicted permease, DMT superfamily | 0.30 | Psest_4073 | | Transcriptional regulator | — | — |
| Ralstonia solanacearum UW163 | 0.21 | UW163_RS23345 | | EamA/RhaT family transporter | 0.57 | UW163_RS02040 | | LysR family transcriptional regulator | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.21 | RALBFv3_RS22750 | | EamA/RhaT family transporter | 0.57 | RALBFv3_RS11545 | | LysR family transcriptional regulator | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.21 | RS_RS17785 | | EamA/RhaT family transporter | 0.56 | RS_RS02375 | | LysR family transcriptional regulator | — | — |
| Acidovorax sp. GW101-3H11 | 0.20 | Ac3H11_777 | | Permeases of the drug/metabolite transporter (DMT) superfamily | 0.56 | Ac3H11_1953 | | Transcriptional regulator | low | > 79 |
| Pseudomonas sp. S08-1 | 0.20 | OH686_07740 | | membrane protein, putative | 0.30 | OH686_13320 | | LysR-family transcriptional regulator | low | > 80 |
| Agrobacterium fabrum C58 | 0.19 | Atu4011 | | hypothetical protein | 0.27 | Atu2512 | | transcriptional regulator, LysR family | low | > 89 |
| Phaeobacter inhibens DSM 17395 | 0.19 | PGA1_c28950 | | putative integral membrane protein | 0.22 | PGA1_c33740 | | HTH-type transcriptional regulator, LysR family | low | > 62 |
| Ralstonia solanacearum PSI07 | 0.18 | RPSI07_RS00440 | | EamA/RhaT family transporter | 0.56 | RPSI07_RS21665 | | LysR family transcriptional regulator | low | > 81 |
| Dinoroseobacter shibae DFL-12 | 0.17 | Dshi_0151 | | protein of unknown function DUF6 transmembrane (RefSeq) | 0.21 | Dshi_1440 | | transcriptional regulator, LysR family (RefSeq) | low | > 64 |
| Sinorhizobium meliloti 1021 | 0.17 | SMc02817 | | hypothetical protein | 0.26 | SMa0097 | | LysR family transcriptional regulator | low | > 103 |
| Marinobacter adhaerens HP15 | 0.09 | HP15_3586 | | membrane protein containing DUF6, transmembrane | 0.24 | HP15_205 | | protein containing bacterial regulatory protein, LysR domain | low | > 73 |
Not shown: 8 genomes with orthologs for HSERO_RS11175 only; 20 genomes with orthologs for HSERO_RS19265 only