Conservation of cofitness between HSERO_RS03615 and HSERO_RS12975 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS03615 (dimethylallyl)adenosine tRNA methylthiotransferase 1.0 HSERO_RS12975 phytoene synthase 0.27 14
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS02195 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.45 QEN71_RS22015 squalene/phytoene synthase family protein low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.75 GFF613 tRNA-i(6)A37 methylthiotransferase 0.60 GFF5110 Phytoene synthase (EC 2.5.1.32) low > 90
Burkholderia phytofirmans PsJN 0.75 BPHYT_RS16535 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.43 BPHYT_RS09330 phytoene synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.75 H281DRAFT_04239 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.46 H281DRAFT_00888 phytoene synthase low > 103
Dechlorosoma suillum PS 0.74 Dsui_1194 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.56 Dsui_2192 squalene synthase HpnD low > 51
Ralstonia solanacearum PSI07 0.73 RPSI07_RS21380 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.52 RPSI07_RS16090 squalene synthase HpnD low > 81
Ralstonia solanacearum IBSBF1503 0.73 RALBFv3_RS11825 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.52 RALBFv3_RS01395 squalene synthase HpnD low > 76
Cupriavidus basilensis FW507-4G11 0.73 RR42_RS02855 dimethylallyladenosine tRNA methylthiotransferase 0.62 RR42_RS07905 phytoene synthase low > 128
Ralstonia solanacearum UW163 0.73 UW163_RS01760 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.52 UW163_RS14705 squalene synthase HpnD — —
Ralstonia sp. UNC404CL21Col 0.73 ABZR87_RS07780 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.51 ABZR87_RS13190 presqualene diphosphate synthase HpnD low > 80
Ralstonia solanacearum GMI1000 0.73 RS_RS02645 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.52 RS_RS08325 squalene synthase HpnD low > 80
Acidovorax sp. GW101-3H11 0.72 Ac3H11_4008 tRNA-i(6)A37 methylthiotransferase 0.63 Ac3H11_927 Phytoene synthase (EC 2.5.1.32) — —
Variovorax sp. OAS795 0.71 ABID97_RS06475 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.67 ABID97_RS17635 presqualene diphosphate synthase HpnD low > 91
Variovorax sp. SCN45 0.71 GFF7320 tRNA-i(6)A37 methylthiotransferase (EC 2.8.4.3) 0.62 GFF497 Phytoene synthase (EC 2.5.1.32) low > 127
Castellaniella sp019104865 MT123 0.70 ABCV34_RS15345 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.66 ABCV34_RS02325 presqualene diphosphate synthase HpnD low > 48
Pantoea sp. MT58 0.63 IAI47_13945 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.18 IAI47_20670 phytoene/squalene synthase family protein low > 76
Azospirillum sp. SherDot2 0.43 MPMX19_02511 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.25 MPMX19_01159 Presqualene diphosphate synthase low > 112
Azospirillum brasilense Sp245 0.43 AZOBR_RS01475 (dimethylallyl)adenosine tRNA methylthiotransferase 0.23 AZOBR_RS15405 phytoene synthase low > 97
Magnetospirillum magneticum AMB-1 0.43 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase 0.27 AMB_RS06915 squalene synthase HpnD — —
Sinorhizobium meliloti 1021 0.43 SMc01115 (dimethylallyl)adenosine tRNA methylthiotransferase 0.09 SMc02055 phytoene synthase low > 103
Brevundimonas sp. GW460-12-10-14-LB2 0.41 A4249_RS14720 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.19 A4249_RS04380 phytoene/squalene synthase family protein low > 48
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_1604 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.16 Ga0059261_2415 Phytoene/squalene synthetase low > 68
Synechococcus elongatus PCC 7942 0.38 Synpcc7942_2374 tRNA-i(6)A37 thiotransferase enzyme MiaB 0.28 Synpcc7942_1984 pys phytoene synthase — —
Rhodopseudomonas palustris CGA009 0.38 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.24 TX73_019380 presqualene diphosphate synthase HpnD — —
Mycobacterium tuberculosis H37Rv 0.35 Rv2733c Conserved hypothetical alanine, arginine-rich protein 0.22 Rv3397c Probable phytoene synthase PhyA low > 58
Echinicola vietnamensis KMM 6221, DSM 17526 0.32 Echvi_2376 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB 0.11 Echvi_1478 Phytoene/squalene synthetase low > 79
Pontibacter actiniarum KMM 6156, DSM 19842 0.32 CA264_05315 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.12 CA264_10905 phytoene synthase low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.30 ABZR88_RS18330 MiaB/RimO family radical SAM methylthiotransferase 0.14 ABZR88_RS16540 phytoene/squalene synthase family protein low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.30 CA265_RS21675 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.11 CA265_RS07600 phytoene synthase low > 88

Not shown: 72 genomes with orthologs for HSERO_RS03615 only; 1 genomes with orthologs for HSERO_RS12975 only