Conservation of cofitness between HSERO_RS13935 and HSERO_RS12850 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS13935 DNAase 1.0 HSERO_RS12850 LuxR family transcriptional regulator 0.42 16
Paraburkholderia sabiae LMG 24235 0.62 QEN71_RS05855 TatD family hydrolase 0.38 QEN71_RS30895 response regulator transcription factor low > 153
Ralstonia solanacearum GMI1000 0.47 RS_RS05570 TatD family deoxyribonuclease 0.38 RS_RS11600 DNA-binding response regulator low > 80
Ralstonia solanacearum UW163 0.45 UW163_RS12230 TatD family deoxyribonuclease 0.38 UW163_RS09550 DNA-binding response regulator — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS14760 TatD family deoxyribonuclease 0.38 RALBFv3_RS04120 DNA-binding response regulator low > 76
Dechlorosoma suillum PS 0.45 Dsui_0503 Mg-dependent DNase 0.41 Dsui_1862 response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain low > 51
Pseudomonas fluorescens GW456-L13 0.36 PfGW456L13_5078 Putative deoxyribonuclease YjjV 0.43 PfGW456L13_2277 DNA-binding response regulator, LuxR family low > 87
Pseudomonas fluorescens FW300-N2E2 0.36 Pf6N2E2_3341 Putative deoxyribonuclease YjjV 0.45 Pf6N2E2_2418 DNA-binding response regulator, LuxR family low > 103
Pseudomonas sp. S08-1 0.36 OH686_16550 Putative deoxyribonuclease YjjV 0.46 OH686_21830 Two-component transcriptional response regulator, NarL/FixJ family low > 80
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_07345 hydrolase TatD 0.45 AO356_02965 LuxR family transcriptional regulator low > 104
Pseudomonas simiae WCS417 0.35 PS417_03955 hydrolase TatD 0.45 PS417_19630 LuxR family transcriptional regulator 0.21 3
Pseudomonas fluorescens SBW25-INTG 0.35 PFLU_RS04000 TatD family hydrolase 0.44 PFLU_RS21600 response regulator transcription factor low > 109
Pseudomonas fluorescens SBW25 0.35 PFLU_RS04000 TatD family hydrolase 0.44 PFLU_RS21600 response regulator transcription factor low > 109
Pseudomonas fluorescens FW300-N1B4 0.35 Pf1N1B4_1148 Putative deoxyribonuclease YjjV 0.42 Pf1N1B4_232 DNA-binding response regulator, LuxR family low > 87
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_05495 hydrolase TatD 0.46 AO353_19270 LuxR family transcriptional regulator low > 101
Kangiella aquimarina DSM 16071 0.34 B158DRAFT_2240 Mg-dependent DNase 0.36 B158DRAFT_1737 two component transcriptional regulator, LuxR family low > 40
Pseudomonas stutzeri RCH2 0.34 Psest_0728 hydrolase, TatD family 0.46 Psest_0662 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain low > 67
Pseudomonas sp. RS175 0.34 PFR28_00103 putative metal-dependent hydrolase YjjV 0.46 PFR28_01009 Transcriptional regulatory protein DegU low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0819 TatD-related deoxyribonuclease 0.42 Psyr_3299 two component transcriptional regulator, LuxR family low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0819 TatD-related deoxyribonuclease 0.42 Psyr_3299 two component transcriptional regulator, LuxR family low > 86
Lysobacter sp. OAE881 0.33 ABIE51_RS12580 TatD family hydrolase 0.34 ABIE51_RS16750 response regulator transcription factor low > 62
Dyella japonica UNC79MFTsu3.2 0.32 ABZR86_RS06375 TatD family hydrolase 0.29 ABZR86_RS05670 response regulator transcription factor low > 74
Pseudomonas putida KT2440 0.32 PP_0791 putative hydrolase 0.47 PP_2126 DNA-binding response regulator, LuxR family low > 96
Klebsiella michiganensis M5al 0.32 BWI76_RS04120 metal-dependent hydrolase 0.29 BWI76_RS06060 DNA-binding response regulator low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1040 Putative deoxyribonuclease YjjV 0.30 GFF3581 Secretion system regulator of DegU/UvrY/BvgA type low > 78
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_11925 TatD family deoxyribonuclease 0.35 CSW01_06455 DNA-binding response regulator low > 62
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS16135 TatD family hydrolase 0.38 LRK54_RS11600 response regulator transcription factor low > 59
Rhodanobacter denitrificans MT42 0.30 LRK55_RS15885 TatD family hydrolase 0.38 LRK55_RS11330 response regulator transcription factor low > 63
Xanthomonas campestris pv. campestris strain 8004 0.28 Xcc-8004.3493.1 Putative deoxyribonuclease YjjV 0.33 Xcc-8004.2612.1 BarA-associated response regulator UvrY (= GacA = SirA) low > 74
Alteromonas macleodii MIT1002 0.23 MIT1002_02710 putative deoxyribonuclease YjjV 0.35 MIT1002_03526 Nitrogen regulation protein C low > 70

Not shown: 39 genomes with orthologs for HSERO_RS13935 only; 21 genomes with orthologs for HSERO_RS12850 only