Conservation of cofitness between HSERO_RS21280 and HSERO_RS10460 in Herbaspirillum seropedicae SmR1

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS21280 allantoinase 1.0 HSERO_RS10460 homoserine dehydrogenase 0.27 16
Ralstonia sp. UNC404CL21Col 0.85 ABZR87_RS15095 allantoinase PuuE 0.76 ABZR87_RS11445 homoserine dehydrogenase — —
Ralstonia solanacearum PSI07 0.84 RPSI07_RS14065 allantoinase PuuE 0.75 RPSI07_RS17490 homoserine dehydrogenase — —
Ralstonia solanacearum UW163 0.84 UW163_RS10480 allantoinase PuuE 0.75 UW163_RS13320 homoserine dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.84 RALBFv3_RS03245 allantoinase PuuE 0.75 RALBFv3_RS15875 homoserine dehydrogenase — —
Ralstonia solanacearum GMI1000 0.83 RS_RS10635 allantoinase PuuE 0.74 RS_RS06655 homoserine dehydrogenase — —
Cupriavidus basilensis FW507-4G11 0.82 RR42_RS05255 allantoinase 0.83 RR42_RS12540 homoserine dehydrogenase — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_05158 putative urate catabolism protein 0.74 H281DRAFT_00810 homoserine dehydrogenase — —
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS07020 allantoinase PuuE 0.74 QEN71_RS22405 homoserine dehydrogenase low > 153
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS11555 allantoinase 0.74 BPHYT_RS08955 homoserine dehydrogenase low > 109
Castellaniella sp019104865 MT123 0.75 ABCV34_RS06095 allantoinase PuuE 0.63 ABCV34_RS02295 homoserine dehydrogenase low > 48
Variovorax sp. SCN45 0.73 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) 0.78 GFF2801 Homoserine dehydrogenase (EC 1.1.1.3) low > 127
Acidovorax sp. GW101-3H11 0.73 Ac3H11_1095 Uricase (urate oxidase) (EC 1.7.3.3) 0.78 Ac3H11_1507 Homoserine dehydrogenase (EC 1.1.1.3) low > 79
Variovorax sp. OAS795 0.72 ABID97_RS22210 allantoinase PuuE 0.77 ABID97_RS10890 homoserine dehydrogenase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) 0.78 GFF3935 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas putida KT2440 0.66 PP_4286 allantoinase 0.66 PP_1470 Homoserine dehydrogenase — —
Azospirillum sp. SherDot2 0.64 MPMX19_04444 hypothetical protein 0.43 MPMX19_00805 Homoserine dehydrogenase — —
Pseudomonas sp. RS175 0.64 PFR28_03143 hypothetical protein 0.65 PFR28_00333 Homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E2 0.64 Pf6N2E2_5805 Uricase (urate oxidase) (EC 1.7.3.3) 0.66 Pf6N2E2_3143 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS21385 allantoinase PuuE 0.66 PFLU_RS24550 homoserine dehydrogenase — —
Pseudomonas fluorescens SBW25 0.64 PFLU_RS21385 allantoinase PuuE 0.66 PFLU_RS24550 homoserine dehydrogenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_19460 allantoinase (EC 3.5.2.5) (from data) 0.66 AO356_06375 homoserine dehydrogenase — —
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4180 Uricase (urate oxidase) (EC 1.7.3.3) 0.66 PfGW456L13_1723 Homoserine dehydrogenase (EC 1.1.1.3) — —
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1809 Polysaccharide deacetylase 0.65 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas stutzeri RCH2 0.64 Psest_1200 putative urate catabolism protein 0.66 Psest_3126 Homoserine dehydrogenase — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1809 Polysaccharide deacetylase 0.65 Psyr_1290 homoserine dehydrogenase — —
Pseudomonas simiae WCS417 0.64 PS417_19415 allantoinase 0.66 PS417_22885 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_02320 allantoinase 0.66 AO353_04355 homoserine dehydrogenase low > 101
Azospirillum brasilense Sp245 0.63 AZOBR_RS14190 chitin deacetylase 0.43 AZOBR_RS07835 homoserine dehydrogenase — —
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3766 Uricase (urate oxidase) (EC 1.7.3.3) 0.66 Pf1N1B4_3013 Homoserine dehydrogenase (EC 1.1.1.3) — —
Caulobacter crescentus NA1000 0.60 CCNA_02688 PuuE-related allantoinase 0.29 CCNA_01447 homoserine dehydrogenase low > 66
Caulobacter crescentus NA1000 Δfur 0.60 CCNA_02688 PuuE-related allantoinase 0.29 CCNA_01447 homoserine dehydrogenase — —
Agrobacterium fabrum C58 0.56 Atu2328 hypothetical protein 0.40 Atu1588 homoserine dehydrogenase low > 89
Rhizobium sp. OAE497 0.56 ABIE40_RS13840 allantoinase PuuE 0.39 ABIE40_RS08650 homoserine dehydrogenase — —

Not shown: 12 genomes with orthologs for HSERO_RS21280 only; 18 genomes with orthologs for HSERO_RS10460 only