Conservation of cofitness between HSERO_RS16335 and HSERO_RS05165 in Herbaspirillum seropedicae SmR1

42 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS16335 guanine deaminase 1.0 HSERO_RS05165 galactose-1-epimerase 0.31 5
Paraburkholderia graminis OAS925 0.62 ABIE53_003192 guanine deaminase 0.30 ABIE53_003549 aldose 1-epimerase low > 113
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS15100 guanine deaminase 0.30 BPHYT_RS16910 aldose 1-epimerase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.62 H281DRAFT_03965 guanine deaminase 0.31 H281DRAFT_06302 aldose 1-epimerase low > 103
Castellaniella sp019104865 MT123 0.61 ABCV34_RS12195 guanine deaminase 0.13 ABCV34_RS14765 aldose epimerase low > 48
Ralstonia solanacearum PSI07 0.61 RPSI07_RS14150 guanine deaminase 0.27 RPSI07_RS11410 aldose 1-epimerase low > 81
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS03160 guanine deaminase 0.17 RALBFv3_RS14600 aldose 1-epimerase low > 76
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS03900 guanine deaminase 0.29 QEN71_RS27070 aldose 1-epimerase low > 153
Ralstonia solanacearum UW163 0.60 UW163_RS10565 guanine deaminase 0.17 UW163_RS12070 aldose 1-epimerase — —
Ralstonia solanacearum GMI1000 0.60 RS_RS10530 guanine deaminase 0.25 RS_RS13780 aldose 1-epimerase low > 80
Ralstonia sp. UNC404CL21Col 0.59 ABZR87_RS15060 guanine deaminase 0.26 ABZR87_RS01460 aldose 1-epimerase low > 80
Pseudomonas simiae WCS417 0.53 PS417_20900 guanine deaminase 0.30 PS417_17385 aldose epimerase low > 88
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4087 Guanine deaminase (EC 3.5.4.3) 0.30 PfGW456L13_3510 Aldose 1-epimerase low > 87
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS22515 guanine deaminase 0.30 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS22515 guanine deaminase 0.30 PFLU_RS19310 aldose 1-epimerase low > 109
Pseudomonas stutzeri RCH2 0.53 Psest_1208 guanine deaminase 0.24 Psest_0379 Galactose mutarotase and related enzymes low > 67
Pseudomonas sp. RS175 0.52 PFR28_01061 Guanine deaminase 0.29 PFR28_02441 putative protein YphB low > 88
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_2339 Guanine deaminase (EC 3.5.4.3) 0.29 Pf6N2E2_484 Aldose 1-epimerase low > 103
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_02575 guanine deaminase 0.28 AO356_23040 aldose epimerase low > 104
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1812 guanine deaminase 0.31 Psyr_0896 Aldose 1-epimerase low > 86
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1812 guanine deaminase 0.31 Psyr_0896 Aldose 1-epimerase low > 86
Pseudomonas putida KT2440 0.51 PP_4281 guanine deaminase 0.29 PP_1165 conserved protein of unknown function low > 96
Escherichia coli ECOR38 0.50 HEPCGN_18915 guaD guanine deaminase 0.26 HEPCGN_20690 yphB Uncharacterized protein YphB low > 87
Escherichia coli BL21 0.50 ECD_02716 guanine deaminase 0.27 ECD_02436 mutarotase superfamily protein, YphB family low > 61
Escherichia coli ECRC102 0.50 NIAGMN_17395 guaD guanine deaminase 0.26 NIAGMN_19320 yphB Uncharacterized protein YphB — —
Escherichia coli BW25113 0.50 b2883 guaD guanine deaminase (NCBI) 0.27 b2544 yphB hypothetical protein (NCBI) low > 76
Escherichia coli ECRC100 0.50 OKFHMN_19625 guaD guanine deaminase 0.26 OKFHMN_21550 yphB Uncharacterized protein YphB low > 80
Escherichia coli ECOR27 0.50 NOLOHH_11555 guaD guanine deaminase 0.27 NOLOHH_13220 yphB Uncharacterized protein YphB low > 75
Escherichia coli ECRC62 0.50 BNILDI_10080 guaD guanine deaminase 0.27 BNILDI_12020 yphB Uncharacterized protein YphB low > 75
Escherichia coli ECRC99 0.50 KEDOAH_08510 guaD guanine deaminase 0.26 KEDOAH_06670 yphB Uncharacterized protein YphB — —
Escherichia coli ECRC98 0.50 JDDGAC_23270 guaD guanine deaminase 0.26 JDDGAC_25225 yphB Uncharacterized protein YphB low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS16065 guanine deaminase 0.26 ECOLIN_RS14405 aldose 1-epimerase low > 55
Escherichia fergusonii Becca 0.50 EFB2_01018 Guanine deaminase 0.26 EFB2_01352 putative protein YphB low > 86
Escherichia coli ECRC101 0.50 MCAODC_10150 guaD guanine deaminase 0.26 MCAODC_12080 yphB Uncharacterized protein YphB low > 87
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_02699 guanine deaminase 0.22 CCNA_03432 aldose 1-epimerase low > 67
Caulobacter crescentus NA1000 0.50 CCNA_02699 guanine deaminase 0.22 CCNA_03432 aldose 1-epimerase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_00832 Guanine deaminase 0.27 OHPLBJKB_01165 putative protein YphB low > 73
Acidovorax sp. GW101-3H11 0.49 Ac3H11_1117 Guanine deaminase (EC 3.5.4.3) 0.39 Ac3H11_616 Aldose 1-epimerase low > 79
Sinorhizobium meliloti 1021 0.48 SM_b21293 guanine deaminase 0.27 SMa0077 hypothetical protein low > 103
Bosea sp. OAE506 0.47 ABIE41_RS21745 guanine deaminase 0.18 ABIE41_RS03780 hypothetical protein low > 77
Serratia liquefaciens MT49 0.46 IAI46_11780 guanine deaminase 0.23 IAI46_21790 aldose 1-epimerase low > 86
Azospirillum sp. SherDot2 0.45 MPMX19_05617 Guanine deaminase 0.25 MPMX19_01184 putative protein YphB low > 112
Lysobacter sp. OAE881 0.45 ABIE51_RS09675 guanine deaminase 0.11 ABIE51_RS03715 aldose epimerase low > 62

Not shown: 21 genomes with orthologs for HSERO_RS16335 only; 2 genomes with orthologs for HSERO_RS05165 only