Conservation of cofitness between HSERO_RS11175 and HSERO_RS02410 in Herbaspirillum seropedicae SmR1

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Herbaspirillum seropedicae SmR1 1.0 HSERO_RS11175 multidrug DMT transporter permease 1.0 HSERO_RS02410 acriflavine resistance protein B 0.30 20
Cupriavidus basilensis FW507-4G11 0.42 RR42_RS09065 multidrug DMT transporter permease 0.66 RR42_RS20650 multidrug efflux RND transporter permease subunit low > 128
Castellaniella sp019104865 MT123 0.31 ABCV34_RS14990 DMT family transporter 0.58 ABCV34_RS04225 efflux RND transporter permease subunit low > 48
Pseudomonas simiae WCS417 0.31 PS417_24455 membrane protein 0.62 PS417_12585 acriflavine resistance protein B low > 88
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_1422 membrane protein, putative 0.63 PfGW456L13_2954 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas sp. RS175 0.30 PFR28_03816 Riboflavin transporter 0.63 PFR28_02463 Multidrug resistance protein MexB low > 88
Pseudomonas fluorescens SBW25-INTG 0.30 PFLU_RS26380 DMT family transporter 0.62 PFLU_RS13280 multidrug efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens SBW25 0.30 PFLU_RS26380 DMT family transporter 0.62 PFLU_RS13280 multidrug efflux RND transporter permease subunit low > 109
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_5055 membrane protein, putative 0.63 Pf6N2E2_1661 RND efflux system, inner membrane transporter CmeB low > 103
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_2745 membrane protein, putative 0.64 Pf1N1B4_4772 RND efflux system, inner membrane transporter CmeB low > 87
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_15570 hypothetical protein 0.63 AO356_28730 acriflavine resistance protein B low > 104
Pseudomonas syringae pv. syringae B728a 0.28 Psyr_2128 Protein of unknown function DUF6 0.57 Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.28 Psyr_2128 Protein of unknown function DUF6 0.57 Psyr_2282 Hydrophobe/amphiphile efflux-1 HAE1 low > 86
Pseudomonas fluorescens FW300-N2E3 0.28 AO353_06205 hypothetical protein 0.63 AO353_26845 acriflavine resistance protein B low > 101
Variovorax sp. OAS795 0.27 ABID97_RS22600 DMT family transporter 0.67 ABID97_RS00325 efflux RND transporter permease subunit low > 91
Rhodopseudomonas palustris CGA009 0.26 TX73_011095 DMT family transporter 0.60 TX73_020235 efflux RND transporter permease subunit low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.26 GFF113 Membrane protein, putative 0.68 GFF3840 RND efflux system, inner membrane transporter CmeB low > 90
Variovorax sp. SCN45 0.25 GFF5790 putative membrane protein 0.67 GFF3725 RND efflux system, inner membrane transporter low > 127
Pseudomonas putida KT2440 0.25 PP_3670 putative permease of the drug/metabolite transporter superfamily 0.62 PP_3456 Multidrug resistance protein MexB low > 96
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS22750 EamA/RhaT family transporter 0.76 RALBFv3_RS09445 multidrug efflux RND transporter permease subunit low > 76
Ralstonia solanacearum UW163 0.21 UW163_RS23345 EamA/RhaT family transporter 0.76 UW163_RS04135 multidrug efflux RND transporter permease subunit — —
Ralstonia solanacearum GMI1000 0.21 RS_RS17785 EamA/RhaT family transporter 0.76 RS_RS00045 multidrug efflux RND transporter permease subunit — —
Acidovorax sp. GW101-3H11 0.20 Ac3H11_777 Permeases of the drug/metabolite transporter (DMT) superfamily 0.68 Ac3H11_4448 RND efflux system, inner membrane transporter CmeB low > 79
Agrobacterium fabrum C58 0.19 Atu4011 hypothetical protein 0.61 Atu3202 RND multidrug efflux transporter low > 89
Ralstonia solanacearum PSI07 0.18 RPSI07_RS00440 EamA/RhaT family transporter 0.76 RPSI07_RS23905 hydrophobe/amphiphile efflux-1 family RND transporter low > 81
Rhodospirillum rubrum S1H 0.17 Rru_A2777 Protein of unknown function DUF6, transmembrane (NCBI) 0.58 Rru_A1118 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) low > 58
Sinorhizobium meliloti 1021 0.17 SMc02817 hypothetical protein 0.65 SMc02867 multidrug-efflux system transmembrane protein low > 103
Rhodanobacter denitrificans MT42 0.13 LRK55_RS15450 DMT family transporter 0.48 LRK55_RS01875 multidrug efflux RND transporter permease subunit low > 63
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS15700 DMT family transporter 0.48 LRK54_RS02100 multidrug efflux RND transporter permease subunit low > 59
Marinobacter adhaerens HP15 0.09 HP15_3586 membrane protein containing DUF6, transmembrane 0.40 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family low > 73

Not shown: 11 genomes with orthologs for HSERO_RS11175 only; 16 genomes with orthologs for HSERO_RS02410 only