Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Dickeya dianthicola 67-19 | 1.0 | HGI48_RS03400 | | aminomethyl-transferring glycine dehydrogenase | 1.0 | HGI48_RS12860 | | FAD-binding oxidoreductase | 0.65 | 2 |
Dickeya dianthicola ME23 | 0.98 | DZA65_RS03445 | | aminomethyl-transferring glycine dehydrogenase | 0.99 | DZA65_RS13325 | | FAD-binding oxidoreductase | low | > 75 |
Dickeya dadantii 3937 | 0.93 | DDA3937_RS03255 | | aminomethyl-transferring glycine dehydrogenase | 0.97 | DDA3937_RS12795 | | FAD-binding oxidoreductase | low | > 74 |
Pectobacterium carotovorum WPP14 | 0.85 | HER17_RS17995 | | aminomethyl-transferring glycine dehydrogenase | 0.86 | HER17_RS08905 | | FAD-binding oxidoreductase | low | > 75 |
Serratia liquefaciens MT49 | 0.82 | IAI46_20850 | | aminomethyl-transferring glycine dehydrogenase | 0.83 | IAI46_11130 | | FAD-binding oxidoreductase | low | > 86 |
Rahnella sp. WP5 | 0.82 | EX31_RS21520 | | aminomethyl-transferring glycine dehydrogenase | 0.81 | EX31_RS13925 | | FAD-binding oxidoreductase | low | > 89 |
Pantoea sp. MT58 | 0.82 | IAI47_03775 | | aminomethyl-transferring glycine dehydrogenase | 0.80 | IAI47_10890 | | FAD-binding oxidoreductase | low | > 76 |
Escherichia fergusonii Becca | 0.81 | EFB2_00999 | | Glycine dehydrogenase (decarboxylating) | 0.81 | EFB2_02305 | | hypothetical protein | low | > 86 |
Escherichia coli Nissle 1917 | 0.81 | ECOLIN_RS16165 | | aminomethyl-transferring glycine dehydrogenase | 0.81 | ECOLIN_RS09430 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 55 |
Escherichia coli ECOR38 | 0.81 | HEPCGN_18820 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | HEPCGN_05615 | ydiJ | Uncharacterized protein YdiJ | low | > 87 |
Escherichia coli ECRC99 | 0.81 | KEDOAH_08610 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | KEDOAH_00880 | ydiJ | Uncharacterized protein YdiJ | — | — |
Escherichia coli ECRC98 | 0.81 | JDDGAC_23170 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | JDDGAC_01805 | ydiJ | Uncharacterized protein YdiJ | low | > 86 |
Escherichia coli ECRC101 | 0.81 | MCAODC_10050 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | MCAODC_18180 | ydiJ | Uncharacterized protein YdiJ | low | > 87 |
Escherichia coli ECRC100 | 0.81 | OKFHMN_19530 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | OKFHMN_27230 | ydiJ | Uncharacterized protein YdiJ | low | > 80 |
Escherichia coli ECRC102 | 0.81 | NIAGMN_17295 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | NIAGMN_00835 | ydiJ | Uncharacterized protein YdiJ | — | — |
Escherichia coli ECRC62 | 0.81 | BNILDI_09980 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | BNILDI_16540 | ydiJ | Uncharacterized protein YdiJ | low | > 75 |
Escherichia coli BW25113 | 0.81 | b2903 | gcvP | glycine dehydrogenase (NCBI) | 0.81 | b1687 | ydiJ | predicted FAD-linked oxidoreductase (NCBI) | low | > 76 |
Escherichia coli BL21 | 0.81 | ECD_02735 | | glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex | 0.81 | ECD_01656 | | putative FAD-linked oxidoreductase | low | > 61 |
Escherichia coli ECOR27 | 0.81 | NOLOHH_11445 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.81 | NOLOHH_17750 | ydiJ | Uncharacterized protein YdiJ | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.81 | OHPLBJKB_00812 | | Glycine dehydrogenase (decarboxylating) | 0.81 | OHPLBJKB_02037 | | hypothetical protein | low | > 73 |
Klebsiella michiganensis M5al | 0.80 | BWI76_RS23870 | | Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) | 0.82 | BWI76_RS17050 | | FAD-binding oxidoreductase | low | > 92 |
Erwinia tracheiphila SCR3 | 0.80 | LU632_RS05915 | gcvP | aminomethyl-transferring glycine dehydrogenase | 0.80 | LU632_RS11040 | | FAD-binding oxidoreductase | 0.80 | 16 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.80 | GFF3003 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.81 | GFF3554 | | Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD | 0.49 | 51 |
Enterobacter sp. TBS_079 | 0.79 | MPMX20_03762 | | Glycine dehydrogenase (decarboxylating) | 0.82 | MPMX20_01926 | | hypothetical protein | low | > 85 |
Enterobacter asburiae PDN3 | 0.79 | EX28DRAFT_2955 | | glycine dehydrogenase (decarboxylating) | 0.81 | EX28DRAFT_1696 | | FAD/FMN-containing dehydrogenases | low | > 76 |
Shewanella amazonensis SB2B | 0.69 | Sama_2719 | | glycine dehydrogenase (RefSeq) | 0.57 | Sama_2071 | | oxidoreductase, FAD-binding, putative (RefSeq) | low | > 62 |
Shewanella oneidensis MR-1 | 0.68 | SO0781 | gcvP | glycine cleavage system P protein (NCBI ptt file) | 0.60 | SO2643 | | oxidoreductase, FAD-binding, putative (NCBI ptt file) | low | > 76 |
Shewanella sp. ANA-3 | 0.67 | Shewana3_3499 | | glycine dehydrogenase (RefSeq) | 0.59 | Shewana3_1737 | | FAD linked oxidase domain-containing protein (RefSeq) | low | > 73 |
Shewanella loihica PV-4 | 0.67 | Shew_3062 | | glycine dehydrogenase (RefSeq) | 0.58 | Shew_1550 | | FAD linked oxidase domain-containing protein (RefSeq) | low | > 60 |
Pseudomonas fluorescens FW300-N1B4 | 0.62 | Pf1N1B4_2236 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.45 | Pf1N1B4_4229 | | Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD | low | > 87 |
Pseudomonas putida KT2440 | 0.61 | PP_5192 | | glycine dehydrogenase | 0.48 | PP_4493 | | D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) (from data) | low | > 96 |
Vibrio cholerae E7946 ATCC 55056 | 0.57 | CSW01_15330 | | glycine dehydrogenase (decarboxylating) | 0.63 | CSW01_06060 | | FAD-binding oxidoreductase | low | > 62 |
Paraburkholderia bryophila 376MFSha3.1 | 0.57 | H281DRAFT_02409 | | glycine dehydrogenase | 0.16 | H281DRAFT_03563 | | FAD/FMN-containing dehydrogenase | low | > 103 |
Pseudomonas sp. RS175 | 0.57 | PFR28_03383 | | Glycine dehydrogenase (decarboxylating) | 0.46 | PFR28_01530 | | hypothetical protein | low | > 88 |
Burkholderia phytofirmans PsJN | 0.56 | BPHYT_RS19330 | | glycine cleavage system P protein (EC 1.4.4.2) (from data) | 0.16 | BPHYT_RS34425 | | lactate dehydrogenase | low | > 109 |
Paraburkholderia sabiae LMG 24235 | 0.56 | QEN71_RS29215 | | aminomethyl-transferring glycine dehydrogenase | 0.16 | QEN71_RS40185 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 153 |
Paraburkholderia graminis OAS925 | 0.56 | ABIE53_000238 | | glycine dehydrogenase | 0.16 | ABIE53_004693 | | FAD/FMN-containing dehydrogenase/Fe-S oxidoreductase | low | > 113 |
Pseudomonas fluorescens FW300-N2C3 | 0.56 | AO356_18170 | | glycine dehydrogenase | 0.48 | AO356_29050 | | hypothetical protein | low | > 104 |
Cupriavidus basilensis FW507-4G11 | 0.56 | RR42_RS20070 | | glycine dehydrogenase | 0.17 | RR42_RS30390 | | lactate dehydrogenase | low | > 128 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.56 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | 0.47 | Psyr_2533 | | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.56 | Psyr_1096 | | glycine dehydrogenase (decarboxylating) alpha subunit / glycine dehydrogenase (decarboxylating) beta subunit | 0.47 | Psyr_2533 | | FAD linked oxidase, C-terminal:FAD linked oxidase, N-terminal | low | > 86 |
Variovorax sp. OAS795 | 0.54 | ABID97_RS19655 | | aminomethyl-transferring glycine dehydrogenase | 0.16 | ABID97_RS15850 | | FAD-linked oxidase C-terminal domain-containing protein | low | > 91 |
Variovorax sp. SCN45 | 0.54 | GFF6478 | | Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) | 0.15 | GFF1371 | | Fe-S protein, homolog of lactate dehydrogenase SO1521 | low | > 127 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.54 | Echvi_0744 | | glycine dehydrogenase (decarboxylating) | 0.20 | Echvi_3865 | | FAD/FMN-containing dehydrogenases | 0.36 | 27 |
Rhizobium sp. OAE497 | 0.53 | ABIE40_RS09950 | | aminomethyl-transferring glycine dehydrogenase | 0.44 | ABIE40_RS21040 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 107 |
Mucilaginibacter yixingensis YX-36 DSM 26809 | 0.53 | ABZR88_RS01785 | | aminomethyl-transferring glycine dehydrogenase | 0.08 | ABZR88_RS15005 | | FAD-binding and (Fe-S)-binding domain-containing protein | low | > 71 |
Dinoroseobacter shibae DFL-12 | 0.53 | Dshi_2680 | | glycine dehydrogenase (RefSeq) | 0.15 | Dshi_3324 | | FAD linked oxidase domain protein (RefSeq) | low | > 64 |
Not shown: 39 genomes with orthologs for HGI48_RS03400 only; 1 genomes with orthologs for HGI48_RS12860 only