| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Dickeya dianthicola 67-19 | 1.0 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | 1.0 | HGI48_RS12805 | | pyruvate kinase PykF | 0.81 | 9 |
| Dickeya dianthicola ME23 | 0.99 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.99 | DZA65_RS13270 | | pyruvate kinase PykF | low | > 75 |
| Dickeya dadantii 3937 | 0.99 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.97 | DDA3937_RS12740 | | pyruvate kinase PykF | low | > 74 |
| Pectobacterium carotovorum WPP14 | 0.90 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.90 | HER17_RS08960 | | pyruvate kinase PykF | low | > 75 |
| Serratia liquefaciens MT49 | 0.88 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.87 | IAI46_11185 | | pyruvate kinase PykF | low | > 86 |
| Rahnella sp. WP5 | 0.87 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.87 | EX31_RS13870 | | pyruvate kinase PykF | low | > 89 |
| Erwinia tracheiphila SCR3 | 0.85 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.86 | LU632_RS11145 | pykF | pyruvate kinase PykF | low | > 74 |
| Escherichia coli ECOR38 | 0.79 | HEPCGN_15550 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | HEPCGN_05675 | pykF | pyruvate kinase PykF | — | — |
| Escherichia coli BW25113 | 0.79 | b3460 | livJ | leucine/isoleucine/valine transporter subunit (NCBI) | 0.84 | b1676 | pykF | pyruvate kinase (NCBI) | low | > 76 |
| Escherichia coli ECRC102 | 0.79 | NIAGMN_14490 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | NIAGMN_00775 | pykF | pyruvate kinase PykF | — | — |
| Escherichia coli ECRC101 | 0.79 | MCAODC_07250 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | MCAODC_18120 | pykF | pyruvate kinase PykF | — | — |
| Escherichia coli ECRC99 | 0.79 | KEDOAH_11420 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | KEDOAH_00820 | pykF | pyruvate kinase PykF | — | — |
| Escherichia coli ECRC62 | 0.79 | BNILDI_02990 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | BNILDI_16600 | pykF | pyruvate kinase PykF | low | > 75 |
| Escherichia coli Nissle 1917 | 0.79 | ECOLIN_RS19790 | | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | ECOLIN_RS09375 | | pyruvate kinase PykF | low | > 55 |
| Escherichia coli ECRC98 | 0.79 | JDDGAC_20350 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | JDDGAC_01865 | pykF | pyruvate kinase PykF | — | — |
| Escherichia coli ECOR27 | 0.79 | NOLOHH_08525 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | NOLOHH_17810 | pykF | pyruvate kinase PykF | low | > 75 |
| Escherichia coli ECRC100 | 0.79 | OKFHMN_16720 | livJ | branched chain amino acid ABC transporter substrate-binding protein LivJ | 0.84 | OKFHMN_27290 | pykF | pyruvate kinase PykF | — | — |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.79 | OHPLBJKB_00243 | | Leu/Ile/Val-binding protein | 0.84 | OHPLBJKB_02048 | | Pyruvate kinase I | low | > 73 |
| Escherichia fergusonii Becca | 0.79 | EFB2_00362 | | Leu/Ile/Val-binding protein | 0.84 | EFB2_02316 | | Pyruvate kinase I | low | > 86 |
| Escherichia coli BL21 | 0.79 | ECD_03309 | | branched-chain amino acid ABC transporter periplasmic binding protein | 0.84 | ECD_01645 | | pyruvate kinase I | low | > 61 |
| Klebsiella michiganensis M5al | 0.79 | BWI76_RS26365 | | branched chain amino acid ABC transporter substrate-binding protein | 0.84 | BWI76_RS16960 | | pyruvate kinase | — | — |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.79 | GFF545 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.86 | GFF3567 | | Pyruvate kinase (EC 2.7.1.40) | low | > 78 |
| Pantoea sp. MT58 | 0.78 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.87 | IAI47_10840 | | pyruvate kinase PykF | low | > 76 |
| Enterobacter sp. TBS_079 | 0.78 | MPMX20_04334 | | Leucine-specific-binding protein | 0.85 | MPMX20_01951 | | Pyruvate kinase I | low | > 85 |
| Enterobacter asburiae PDN3 | 0.78 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.85 | EX28DRAFT_1679 | | pyruvate kinase | low | > 76 |
| Pseudomonas fluorescens FW300-N1B4 | 0.60 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.31 | Pf1N1B4_3657 | | Pyruvate kinase (EC 2.7.1.40) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.60 | AO356_05320 | | leucine ABC transporter substrate-binding protein | 0.31 | AO356_19600 | | pyruvate kinase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.60 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | 0.30 | Pf6N2E2_5835 | | Pyruvate kinase (EC 2.7.1.40) | low | > 103 |
| Pseudomonas fluorescens GW456-L13 | 0.60 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.31 | PfGW456L13_4299 | | Pyruvate kinase (EC 2.7.1.40) | low | > 87 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_17125 | | leucine ABC transporter substrate-binding protein | 0.31 | AO353_01940 | | pyruvate kinase | low | > 101 |
| Pseudomonas putida KT2440 | 0.59 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | 0.31 | PP_4301 | | Pyruvate kinase | low | > 96 |
| Pseudomonas fluorescens SBW25-INTG | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.31 | PFLU_RS08850 | | pyruvate kinase | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.59 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.31 | PFLU_RS08850 | | pyruvate kinase | low | > 109 |
| Pseudomonas simiae WCS417 | 0.59 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | 0.31 | PS417_08790 | | pyruvate kinase | low | > 88 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.31 | PFR28_03114 | | Pyruvate kinase | low | > 88 |
| Cupriavidus basilensis FW507-4G11 | 0.53 | RR42_RS14425 | | leucine ABC transporter substrate-binding protein | 0.33 | RR42_RS33735 | | pyruvate kinase | low | > 128 |
| Castellaniella sp019104865 MT123 | 0.47 | ABCV34_RS03585 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.32 | ABCV34_RS12115 | | pyruvate kinase | low | > 48 |
| Azospirillum sp. SherDot2 | 0.39 | MPMX19_04840 | | Leu/Ile/Val-binding protein | 0.33 | MPMX19_04074 | | Pyruvate kinase | low | > 112 |
| Rhodospirillum rubrum S1H | 0.38 | Rru_A1746 | | Extracellular ligand-binding receptor (NCBI) | 0.32 | Rru_A2465 | | Pyruvate kinase (NCBI) | — | — |
| Bosea sp. OAE506 | 0.34 | ABIE41_RS13610 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.30 | ABIE41_RS06285 | | pyruvate kinase | low | > 77 |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | 0.31 | AZOBR_RS06845 | | pyruvate kinase | low | > 97 |
| Variovorax sp. OAS795 | 0.30 | ABID97_RS27585 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.30 | ABID97_RS24455 | | pyruvate kinase | low | > 91 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.29 | DVU0547 | | high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) | 0.27 | DVU2514 | pyk | pyruvate kinase (TIGR) | low | > 55 |
| Desulfovibrio vulgaris Miyazaki F | 0.28 | DvMF_2607 | | Extracellular ligand-binding receptor (RefSeq) | 0.27 | DvMF_0965 | | pyruvate kinase (RefSeq) | low | > 51 |
| Ralstonia solanacearum IBSBF1503 | 0.23 | RALBFv3_RS04695 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.33 | RALBFv3_RS17015 | | pyruvate kinase | low | > 76 |
| Fusobacterium nucleatum SB010 | 0.17 | HUW76_08115 | | ABC transporter substrate-binding protein | 0.62 | HUW76_00910 | | pyruvate kinase PykF | — | — |
| Bifidobacterium breve UCC2003 | 0.13 | BBR_RS18075 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.34 | BBR_RS14295 | | pyruvate kinase | — | — |
Not shown: 21 genomes with orthologs for HGI48_RS20730 only; 17 genomes with orthologs for HGI48_RS12805 only