Conservation of cofitness between HGI48_RS14460 and HGI48_RS11195 in Dickeya dianthicola 67-19

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein 1.0 HGI48_RS11195 D-amino acid dehydrogenase 0.47 11
Dickeya dianthicola ME23 1.00 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein 0.99 DZA65_RS11540 D-amino acid dehydrogenase low > 75
Dickeya dadantii 3937 0.96 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.96 DDA3937_RS11170 D-amino acid dehydrogenase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF1560 Tricarboxylate transport protein TctC 0.74 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 78
Enterobacter sp. TBS_079 0.78 MPMX20_03193 hypothetical protein 0.74 MPMX20_02699 D-amino acid dehydrogenase low > 85
Pantoea sp. MT58 0.77 IAI47_06210 tripartite tricarboxylate transporter substrate binding protein 0.73 IAI47_08890 D-amino acid dehydrogenase low > 76
Serratia liquefaciens MT49 0.77 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein 0.75 IAI46_14460 D-amino acid dehydrogenase low > 86
Klebsiella michiganensis M5al 0.76 BWI76_RS20035 hypothetical protein 0.74 BWI76_RS17735 D-amino acid dehydrogenase small subunit low > 92
Pseudomonas sp. S08-1 0.63 OH686_19995 Tripartite tricarboxylate transporter TctC family 0.64 OH686_13685 D-amino acid dehydrogenase low > 80
Pseudomonas putida KT2440 0.62 PP_1418 putative Tricarboxylate transport protein TctC 0.64 PP_5270 D-amino-acid:quinone oxidoreductase (deaminating) low > 96
Pseudomonas stutzeri RCH2 0.62 Psest_0206 Uncharacterized protein conserved in bacteria 0.62 Psest_3793 D-alanine dehydrogenase (EC 1.4.99.-) (from data) low > 67
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_3313 Tricarboxylate transport protein TctC 0.64 Pf1N1B4_2144 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 87
Pseudomonas simiae WCS417 0.62 PS417_07075 tricarboxylic transport membrane protein 0.64 PS417_27705 amino acid dehydrogenase low > 88
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_4526 Tricarboxylate transport protein TctC 0.64 PfGW456L13_812 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_2768 Tricarboxylate transport protein TctC 0.64 Pf6N2E2_4391 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 103
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17580 tricarboxylic transporter 0.65 AO353_09155 amino acid dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_04615 tricarboxylic transporter 0.64 AO356_12620 amino acid dehydrogenase low > 104
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.64 PFLU_RS29380 D-amino acid dehydrogenase low > 109
Pseudomonas fluorescens SBW25 0.61 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.64 PFLU_RS29380 D-amino acid dehydrogenase low > 109
Pseudomonas sp. RS175 0.61 PFR28_00681 hypothetical protein 0.64 PFR28_04399 D-amino acid dehydrogenase 1 low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.60 Psyr_3966 Uncharacterized protein UPF0065 0.64 Psyr_0235 D-amino acid dehydrogenase small subunit low > 86
Pseudomonas syringae pv. syringae B728a 0.60 Psyr_3966 Uncharacterized protein UPF0065 0.64 Psyr_0235 D-amino acid dehydrogenase small subunit low > 86
Hydrogenophaga sp. GW460-11-11-14-LB1 0.60 GFF3029 Tricarboxylate transport protein TctC 0.38 GFF1973 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) low > 90
Cupriavidus basilensis FW507-4G11 0.58 RR42_RS03285 tricarboxylic transport membrane protein 0.66 RR42_RS04585 amino acid dehydrogenase low > 128
Herbaspirillum seropedicae SmR1 0.49 HSERO_RS22660 tricarboxylate transporter 0.69 HSERO_RS08375 D-amino acid dehydrogenase small subunit low > 78
Acidovorax sp. GW101-3H11 0.45 Ac3H11_112 Tricarboxylate transport protein TctC 0.36 Ac3H11_4848 D-alanine dehydrogenase (EC 1.4.99.-) (from data) low > 79
Variovorax sp. SCN45 0.44 GFF2606 Tripartite tricarboxylate transporter TctC family 0.63 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) low > 127
Variovorax sp. OAS795 0.42 ABID97_RS19745 tripartite tricarboxylate transporter substrate-binding protein 0.64 ABID97_RS22385 D-amino acid dehydrogenase — —
Marinobacter adhaerens HP15 0.30 HP15_2661 Citrate uptake transporter, substrate-binding component TctC (from data) 0.41 HP15_2610 D-amino acid dehydrogenase small subunit 0.31 53
Azospirillum brasilense Sp245 0.21 AZOBR_RS31445 C4-dicarboxylate ABC transporter substrate-binding protein 0.57 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) low > 97
Rhizobium sp. OAE497 0.18 ABIE40_RS16420 tripartite tricarboxylate transporter substrate binding protein 0.14 ABIE40_RS02050 FAD-dependent oxidoreductase low > 107
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_06725 tripartite tricarboxylate transporter substrate-binding protein 0.55 CSW01_04065 D-amino acid dehydrogenase small subunit low > 62
Azospirillum sp. SherDot2 0.16 MPMX19_03915 hypothetical protein 0.58 MPMX19_06097 D-amino acid dehydrogenase 1 low > 112
Dinoroseobacter shibae DFL-12 0.15 Dshi_3123 Tricarboxylate transport protein TctC (from data) 0.51 Dshi_0558 D-amino-acid dehydrogenase (RefSeq) low > 64
Rhodopseudomonas palustris CGA009 0.10 TX73_024390 tripartite tricarboxylate transporter substrate binding protein 0.14 TX73_019540 FAD-dependent oxidoreductase low > 86

Not shown: 4 genomes with orthologs for HGI48_RS14460 only; 42 genomes with orthologs for HGI48_RS11195 only