Conservation of cofitness between HGI48_RS03515 and HGI48_RS01465 in Dickeya dianthicola 67-19

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola 67-19 1.0 HGI48_RS03515 NAD-dependent epimerase/dehydratase family protein 1.0 HGI48_RS01465 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.82 11
Dickeya dianthicola ME23 0.99 DZA65_RS03630 NAD-dependent epimerase/dehydratase family protein 1.00 DZA65_RS01530 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.52 72
Dickeya dadantii 3937 0.90 DDA3937_RS03415 NAD-dependent epimerase/dehydratase family protein 0.99 DDA3937_RS01550 3-deoxy-manno-octulosonate-8-phosphatase KdsC 0.54 42
Vibrio cholerae E7946 ATCC 55056 0.50 CSW01_01355 UDP-glucose 4-epimerase 0.59 CSW01_12795 3-deoxy-manno-octulosonate-8-phosphatase KdsC — —
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_339 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.44 Pf1N1B4_1076 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) — —
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS02375 NAD-dependent dehydratase 0.41 HSERO_RS19835 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 78
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_01980 NAD-dependent dehydratase 0.44 AO353_05160 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase — —
Pseudomonas stutzeri RCH2 0.43 Psest_1823 Nucleoside-diphosphate-sugar epimerases 0.44 Psest_3309 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family — —
Pseudomonas putida KT2440 0.43 PP_1803 UDP-sugar epimerase 0.43 PP_0956 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase — —
Shewanella oneidensis MR-1 0.39 SO3173 UDP-galactose 4-epimerase, putative (NCBI ptt file) 0.52 SO3957 conserved hypothetical protein (NCBI ptt file) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.39 GFF1863 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.28 GFF2443 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) low > 90
Pseudomonas syringae pv. syringae B728a ΔmexB 0.38 Psyr_3638 UDP-glucose 4-epimerase, putative 0.43 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI low > 86
Pseudomonas syringae pv. syringae B728a 0.38 Psyr_3638 UDP-glucose 4-epimerase, putative 0.43 Psyr_4143 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI low > 86
Pseudomonas sp. S08-1 0.37 OH686_20905 UDP-glucose 4-epimerase 0.40 OH686_08520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase — —
Castellaniella sp019104865 MT123 0.33 ABCV34_RS13025 NAD-dependent epimerase/dehydratase family protein 0.36 ABCV34_RS14365 HAD hydrolase family protein — —
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS04375 epimerase 0.38 BPHYT_RS02925 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase — —
Enterobacter asburiae PDN3 0.32 EX28DRAFT_0516 Nucleoside-diphosphate-sugar epimerases 0.77 EX28DRAFT_3252 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family low > 76
Paraburkholderia graminis OAS925 0.31 ABIE53_001161 nucleoside-diphosphate-sugar epimerase 0.39 ABIE53_000722 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) low > 113
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_03355 hypothetical protein 0.43 AO356_07015 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase — —
Paraburkholderia bryophila 376MFSha3.1 0.30 H281DRAFT_04849 UDP-glucose 4-epimerase 0.40 H281DRAFT_01923 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase) low > 103
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS25600 SDR family oxidoreductase 0.42 QEN71_RS01775 HAD family hydrolase — —
Shewanella amazonensis SB2B 0.26 Sama_2249 hypothetical protein (RefSeq) 0.55 Sama_3084 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq) — —
Marinobacter adhaerens HP15 0.26 HP15_2386 UDP-glucose 4-epimerase 0.42 HP15_2438 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family — —
Pedobacter sp. GW460-11-11-14-LB5 0.18 CA265_RS19215 nucleoside-diphosphate-sugar epimerase 0.28 CA265_RS03520 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase low > 88
Phocaeicola dorei CL03T12C01 0.13 ABI39_RS14805 NAD(P)-dependent oxidoreductase 0.27 ABI39_RS12455 HAD-IIIA family hydrolase — —
Bacteroides thetaiotaomicron VPI-5482 0.12 BT2887 putative UDP-galactose 4-epimerase (NCBI ptt file) 0.27 BT1677 putative hydrolase (NCBI ptt file) — —
Pectobacterium carotovorum WPP14 0.10 HER17_RS21015 NAD(P)-dependent oxidoreductase 0.86 HER17_RS20040 3-deoxy-manno-octulosonate-8-phosphatase KdsC low > 75
Synechococcus elongatus PCC 7942 0.09 Synpcc7942_1160 hypothetical protein 0.38 Synpcc7942_2288 Phosphatase kdsC low > 38
Bacteroides stercoris CC31F 0.09 HMPREF1181_RS01540 NAD(P)-dependent oxidoreductase 0.28 HMPREF1181_RS01295 HAD-IIIA family hydrolase — —
Rhodanobacter denitrificans FW104-10B01 0.08 LRK54_RS16530 aldehyde reductase 0.42 LRK54_RS12895 HAD hydrolase family protein — —

Not shown: 5 genomes with orthologs for HGI48_RS03515 only; 53 genomes with orthologs for HGI48_RS01465 only