Conservation of cofitness between HER17_RS04235 and HER17_RS20655 in Pectobacterium carotovorum WPP14

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS04235 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 1.0 HER17_RS20655 phosphoenolpyruvate carboxylase 0.96 4
Dickeya dadantii 3937 0.80 DDA3937_RS16945 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.89 DDA3937_RS20360 phosphoenolpyruvate carboxylase 0.85 31
Dickeya dianthicola 67-19 0.79 HGI48_RS17015 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.89 HGI48_RS00850 phosphoenolpyruvate carboxylase 0.77 57
Dickeya dianthicola ME23 0.79 DZA65_RS18090 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.88 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.68 57
Serratia liquefaciens MT49 0.78 IAI46_03685 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.87 IAI46_24525 phosphoenolpyruvate carboxylase 0.58 49
Pantoea sp. MT58 0.78 IAI47_04150 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 IAI47_00895 phosphoenolpyruvate carboxylase 0.74 72
Rahnella sp. WP5 0.77 EX31_RS07905 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.85 EX31_RS14200 phosphoenolpyruvate carboxylase 0.82 83
Enterobacter asburiae PDN3 0.77 EX28DRAFT_2853 sulfite reductase [NADPH] flavoprotein, alpha-component 0.82 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.78 30
Escherichia coli ECRC62 0.75 BNILDI_10735 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 BNILDI_05785 ppc phosphoenolpyruvate carboxylase 0.96 39
Escherichia coli ECOR27 0.75 NOLOHH_12185 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase 0.90 49
Escherichia coli BW25113 0.75 b2764 cysJ sulfite reductase, alpha subunit, flavoprotein (NCBI) 0.83 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) 0.86 57
Escherichia coli BL21 0.75 ECD_02609 sulfite reductase, alpha subunit, flavoprotein 0.83 ECD_03841 phosphoenolpyruvate carboxylase 0.79 17
Enterobacter sp. TBS_079 0.75 MPMX20_03643 Sulfite reductase [NADPH] flavoprotein alpha-component 0.82 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.50 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_00969 Sulfite reductase [NADPH] flavoprotein alpha-component 0.83 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase low > 73
Escherichia coli Nissle 1917 0.75 ECOLIN_RS15410 NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 ECOLIN_RS22835 phosphoenolpyruvate carboxylase 0.74 39
Escherichia fergusonii Becca 0.75 EFB2_01153 Sulfite reductase [NADPH] flavoprotein alpha-component 0.83 EFB2_04658 Phosphoenolpyruvate carboxylase low > 86
Escherichia coli ECOR38 0.75 HEPCGN_19095 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase 0.98 3
Klebsiella michiganensis M5al 0.74 BWI76_RS22765 sulfite reductase subunit alpha 0.83 BWI76_RS00835 phosphoenolpyruvate carboxylase 0.79 49
Escherichia coli ECRC101 0.74 MCAODC_10895 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 MCAODC_04095 ppc phosphoenolpyruvate carboxylase 0.62 83
Escherichia coli ECRC102 0.74 NIAGMN_18140 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC98 0.74 JDDGAC_24035 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase 0.76 51
Escherichia coli ECRC99 0.74 KEDOAH_07755 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase — —
Escherichia coli ECRC100 0.74 OKFHMN_20370 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase 0.97 36
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF4820 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.82 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) low > 78
Erwinia tracheiphila SCR3 0.73 LU632_RS06400 cysJ NADPH-dependent assimilatory sulfite reductase flavoprotein subunit 0.83 LU632_RS19625 ppc phosphoenolpyruvate carboxylase 0.93 10
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_02010 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.65 CSW01_13390 phosphoenolpyruvate carboxylase low > 62
Shewanella amazonensis SB2B 0.49 Sama_2839 sulfite reductase subunit alpha (RefSeq) 0.57 Sama_0254 phosphoenolpyruvate carboxylase (RefSeq) 0.87 61
Shewanella oneidensis MR-1 0.49 SO3738 cysJ sulfite reductase (NADPH) flavoprotein alpha-component (NCBI ptt file) 0.57 SO0274 ppc phosphoenolpyruvate carboxylase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.49 Shew_0665 sulfite reductase (NADPH) flavoprotein, alpha chain (RefSeq) 0.54 Shew_0200 phosphoenolpyruvate carboxylase (RefSeq) low > 60
Shewanella sp. ANA-3 0.48 Shewana3_0855 sulfite reductase (NADPH) alpha subunit (RefSeq) 0.57 Shewana3_3906 phosphoenolpyruvate carboxylase (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.47 MIT1002_03380 Sulfite reductase [NADPH] flavoprotein alpha-component 0.51 MIT1002_03491 Phosphoenolpyruvate carboxylase — —
Lysobacter sp. OAE881 0.43 ABIE51_RS15825 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.24 ABIE51_RS18965 phosphoenolpyruvate carboxylase 0.96 36
Castellaniella sp019104865 MT123 0.39 ABCV34_RS00220 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.23 ABCV34_RS14805 phosphoenolpyruvate carboxylase low > 48
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_05960 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.22 OKGIIK_11820 ppc phosphoenolpyruvate carboxylase low > 52
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS05905 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.23 ABZR86_RS11555 phosphoenolpyruvate carboxylase 0.93 43
Rhodanobacter denitrificans FW104-10B01 0.37 LRK54_RS00930 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.22 LRK54_RS12075 phosphoenolpyruvate carboxylase 0.53 22
Rhodanobacter denitrificans MT42 0.37 LRK55_RS00705 assimilatory sulfite reductase (NADPH) flavoprotein subunit 0.22 LRK55_RS11810 phosphoenolpyruvate carboxylase low > 63
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.1258.1 Sulfite reductase [NADPH] flavoprotein alpha-component (EC 1.8.1.2) 0.24 Xcc-8004.4314.1 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.69 33
Pseudomonas stutzeri RCH2 0.13 Psest_3345 Sulfite reductase, alpha subunit (flavoprotein) 0.50 Psest_1557 Phosphoenolpyruvate carboxylase low > 67
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.19 CCNA_01560 phosphoenolpyruvate carboxylase low > 67
Caulobacter crescentus NA1000 0.12 CCNA_03159 sulfite reductase (NADPH) flavoprotein alpha-component 0.19 CCNA_01560 phosphoenolpyruvate carboxylase low > 66

Not shown: 2 genomes with orthologs for HER17_RS04235 only; 41 genomes with orthologs for HER17_RS20655 only