Conservation of cofitness between HER17_RS11350 and HER17_RS20585 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11350 23S rRNA (guanine(745)-N(1))-methyltransferase 1.0 HER17_RS20585 Sec-independent protein translocase subunit TatC 0.72 13
Dickeya dadantii 3937 0.64 DDA3937_RS11305 23S rRNA (guanine(745)-N(1))-methyltransferase 0.90 DDA3937_RS20305 Sec-independent protein translocase subunit TatC low > 74
Dickeya dianthicola 67-19 0.64 HGI48_RS11340 23S rRNA (guanine(745)-N(1))-methyltransferase 0.88 HGI48_RS00920 Sec-independent protein translocase subunit TatC low > 71
Dickeya dianthicola ME23 0.63 DZA65_RS11685 23S rRNA (guanine(745)-N(1))-methyltransferase 0.90 DZA65_RS00980 Sec-independent protein translocase subunit TatC low > 75
Serratia liquefaciens MT49 0.61 IAI46_14835 23S rRNA (guanine(745)-N(1))-methyltransferase 0.90 IAI46_01090 Sec-independent protein translocase subunit TatC low > 86
Rahnella sp. WP5 0.61 EX31_RS24675 23S rRNA (guanine(745)-N(1))-methyltransferase 0.88 EX31_RS14600 Sec-independent protein translocase subunit TatC low > 89
Enterobacter sp. TBS_079 0.60 MPMX20_02727 23S rRNA (guanine(745)-N(1))-methyltransferase 0.82 MPMX20_04442 Sec-independent protein translocase protein TatC low > 85
Enterobacter asburiae PDN3 0.59 EX28DRAFT_0737 Methyltransferase domain 0.83 EX28DRAFT_4503 Twin arginine targeting (Tat) protein translocase TatC low > 76
Klebsiella michiganensis M5al 0.58 BWI76_RS17920 23S rRNA (guanine(745)-N(1))-methyltransferase 0.80 BWI76_RS01330 twin-arginine translocase subunit TatC low > 92
Escherichia coli HS(pFamp)R (ATCC 700891) 0.57 OHPLBJKB_01908 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 OHPLBJKB_04213 Sec-independent protein translocase protein TatC low > 73
Escherichia coli BW25113 0.57 b1822 rrmA 23S rRNA m1G745 methyltransferase (NCBI) 0.83 b3839 tatC TatABCE protein translocation system subunit (NCBI) low > 76
Escherichia coli Nissle 1917 0.57 ECOLIN_RS10140 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC — —
Escherichia coli ECRC62 0.57 BNILDI_15805 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 BNILDI_05125 tatC Sec-independent protein translocase subunit TatC low > 75
Escherichia fergusonii Becca 0.57 EFB2_02178 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 EFB2_04777 Sec-independent protein translocase protein TatC low > 86
Escherichia coli ECOR38 0.57 HEPCGN_04900 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 HEPCGN_12905 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli BL21 0.57 ECD_01792 23S rRNA m(1)G745 methyltransferase, SAM-dependent 0.83 ECD_03731 TatABCE protein translocation system subunit low > 61
Escherichia coli ECRC102 0.56 NIAGMN_01560 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 NIAGMN_12030 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECRC99 0.56 KEDOAH_01605 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 KEDOAH_13875 tatC Sec-independent protein translocase subunit TatC — —
Escherichia coli ECRC101 0.56 MCAODC_18905 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 MCAODC_04780 tatC Sec-independent protein translocase subunit TatC low > 87
Escherichia coli ECRC98 0.56 JDDGAC_01075 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 JDDGAC_17900 tatC Sec-independent protein translocase subunit TatC low > 86
Escherichia coli ECRC100 0.56 OKFHMN_26500 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 OKFHMN_14275 tatC Sec-independent protein translocase subunit TatC low > 80
Escherichia coli ECOR27 0.56 NOLOHH_17025 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 NOLOHH_06405 tatC Sec-independent protein translocase subunit TatC low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.54 GFF2836 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.81 GFF265 Twin-arginine translocation protein TatC low > 78
Vibrio cholerae E7946 ATCC 55056 0.53 CSW01_10000 23S rRNA (guanine(745)-N(1))-methyltransferase 0.71 CSW01_00470 twin-arginine translocase subunit TatC low > 62
Pantoea sp. MT58 0.53 IAI47_08750 23S rRNA (guanine(745)-N(1))-methyltransferase 0.84 IAI47_18260 Sec-independent protein translocase subunit TatC — —
Erwinia tracheiphila SCR3 0.52 LU632_RS13200 rlmA 23S rRNA (guanine(745)-N(1))-methyltransferase 0.83 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC low > 74
Shewanella sp. ANA-3 0.43 Shewana3_2570 rrmA 23S rRNA methyltransferase A (RefSeq) 0.64 Shewana3_3730 Sec-independent protein translocase TatC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.42 SO2788 rrmA ribosomal RNA large subunit methyltransferase A (NCBI ptt file) 0.69 SO4204 tatC Sec-independent periplasmic protein translocation protein TatC (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.41 Shew_1613 rrmA 23S rRNA methyltransferase A (RefSeq) 0.65 Shew_3378 Sec-independent protein translocase, TatC subunit (RefSeq) low > 60
Shewanella amazonensis SB2B 0.39 Sama_1971 rrmA 23S rRNA methyltransferase A (RefSeq) 0.60 Sama_3207 Sec-independent periplasmic protein translocation protein TatC (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.35 MPMX26_02818 23S rRNA (guanine(745)-N(1))-methyltransferase 0.43 MPMX26_00396 Sec-independent protein translocase protein TatC low > 36
Alteromonas macleodii MIT1002 0.33 MIT1002_01980 23S rRNA (guanine(745)-N(1))-methyltransferase 0.65 MIT1002_00508 Sec-independent protein translocase protein TatC — —
Pseudomonas putida KT2440 0.31 PP_1524 23S rRNA m1G745 methyltransferase 0.61 PP_5018 sec-independent protein translocase protein — —
Pseudomonas stutzeri RCH2 0.31 Psest_1617 Methylase involved in ubiquinone/menaquinone biosynthesis 0.58 Psest_3947 Twin arginine targeting (Tat) protein translocase TatC — —
Pseudomonas sp. S08-1 0.31 OH686_06565 23S rRNA (guanine(745)-N(1))-methyltransferase 0.62 OH686_10180 twin arginine-targeting protein translocase TatC — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4722 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.61 PfGW456L13_306 Twin-arginine translocation protein TatC — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.30 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.60 Psyr_0382 Sec-independent periplasmic protein translocase low > 86
Pseudomonas syringae pv. syringae B728a 0.30 Psyr_1330 23S rRNA m(1)G-745 methyltransferase 0.60 Psyr_0382 Sec-independent periplasmic protein translocase — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_16405 SAM-dependent methyltransferase 0.61 AO353_12345 twin-arginine protein translocation system subunit TatC low > 101
Pseudomonas sp. RS175 0.29 PFR28_00385 23S rRNA (guanine(745)-N(1))-methyltransferase 0.61 PFR28_04982 Sec-independent protein translocase protein TatC — —
Pseudomonas simiae WCS417 0.29 PS417_06150 SAM-dependent methlyltransferase 0.61 PS417_01835 twin-arginine protein translocation system subunit TatC — —
Pseudomonas fluorescens FW300-N1B4 0.29 Pf1N1B4_3070 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.62 Pf1N1B4_1569 Twin-arginine translocation protein TatC low > 87
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_3084 Ribosomal RNA large subunit methyltransferase A (EC 2.1.1.51) 0.61 Pf6N2E2_3786 Twin-arginine translocation protein TatC low > 103
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_06095 SAM-dependent methyltransferase 0.61 AO356_09540 twin-arginine protein translocation system subunit TatC low > 104
Pseudomonas fluorescens SBW25 0.28 PFLU_RS06215 methyltransferase domain-containing protein 0.62 PFLU_RS01880 twin-arginine translocase subunit TatC 0.69 1
Pseudomonas fluorescens SBW25-INTG 0.28 PFLU_RS06215 methyltransferase domain-containing protein 0.62 PFLU_RS01880 twin-arginine translocase subunit TatC low > 109
Marinobacter adhaerens HP15 0.27 HP15_1754 rRNA (guanine-N1-)-methyltransferase A, predicted 0.57 HP15_3198 Sec-independent protein translocase, TatC subunit — —

Not shown: 0 genomes with orthologs for HER17_RS11350 only; 48 genomes with orthologs for HER17_RS20585 only