Conservation of cofitness between HER17_RS03455 and HER17_RS20585 in Pectobacterium carotovorum WPP14

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS03455 D-threonate 4-phosphate dehydrogenase 1.0 HER17_RS20585 Sec-independent protein translocase subunit TatC 0.90 8
Dickeya dadantii 3937 0.92 DDA3937_RS17835 D-threonate 4-phosphate dehydrogenase 0.90 DDA3937_RS20305 Sec-independent protein translocase subunit TatC low > 74
Dickeya dianthicola ME23 0.91 DZA65_RS18920 D-threonate 4-phosphate dehydrogenase 0.90 DZA65_RS00980 Sec-independent protein translocase subunit TatC low > 75
Dickeya dianthicola 67-19 0.91 HGI48_RS17775 D-threonate 4-phosphate dehydrogenase 0.88 HGI48_RS00920 Sec-independent protein translocase subunit TatC low > 71
Pantoea sp. MT58 0.84 IAI47_15730 D-threonate 4-phosphate dehydrogenase 0.84 IAI47_18260 Sec-independent protein translocase subunit TatC — —
Erwinia tracheiphila SCR3 0.83 LU632_RS04955 D-threonate 4-phosphate dehydrogenase 0.83 LU632_RS23980 tatC Sec-independent protein translocase subunit TatC — —
Klebsiella michiganensis M5al 0.81 BWI76_RS15230 4-hydroxythreonine-4-phosphate dehydrogenase 0.80 BWI76_RS01330 twin-arginine translocase subunit TatC low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF110 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.81 GFF265 Twin-arginine translocation protein TatC low > 78
Escherichia coli Nissle 1917 0.80 ECOLIN_RS03665 D-threonate 4-phosphate dehydrogenase 0.83 ECOLIN_RS22140 Sec-independent protein translocase subunit TatC — —
Escherichia fergusonii Becca 0.80 EFB2_03416 D-threonate 4-phosphate dehydrogenase 0.83 EFB2_04777 Sec-independent protein translocase protein TatC low > 86
Echinicola vietnamensis KMM 6221, DSM 17526 0.42 Echvi_0923 4-hydroxythreonine-4-phosphate dehydrogenase 0.22 Echvi_1187 Twin arginine targeting (Tat) protein translocase TatC — —
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS06570 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.50 QEN71_RS27800 twin-arginine translocase subunit TatC — —
Paraburkholderia graminis OAS925 0.42 ABIE53_003878 4-hydroxythreonine-4-phosphate dehydrogenase 0.51 ABIE53_003688 sec-independent protein translocase protein TatC low > 113
Sinorhizobium meliloti 1021 0.41 SM_b20146 pyridoxal phosphate biosynthetic protein 0.31 SMc02065 SEC-independent translocase transmembrane protein — —
Paraburkholderia bryophila 376MFSha3.1 0.41 H281DRAFT_00649 4-hydroxythreonine-4-phosphate dehydrogenase 0.51 H281DRAFT_05666 Sec-independent protein translocase TatC — —
Rhizobium sp. OAE497 0.40 ABIE40_RS25790 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.30 ABIE40_RS08470 twin-arginine translocase subunit TatC — —
Variovorax sp. OAS795 0.40 ABID97_RS25690 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.37 ABID97_RS23070 twin-arginine translocase subunit TatC — —
Azospirillum brasilense Sp245 0.39 AZOBR_RS27610 4-hydroxythreonine-4-phosphate dehydrogenase 0.35 AZOBR_RS15480 preprotein translocase subunit TatC — —
Ralstonia sp. UNC404CL21Col 0.39 ABZR87_RS05840 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.43 ABZR87_RS02440 twin-arginine translocase subunit TatC low > 80
Agrobacterium fabrum C58 0.39 Atu5073 pyridoxal phosphate biosynthesis protein 0.29 Atu1704 SEC-independent protein translocase protein — —
Castellaniella sp019104865 MT123 0.39 ABCV34_RS02270 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.49 ABCV34_RS11280 twin-arginine translocase subunit TatC — —
Azospirillum sp. SherDot2 0.39 MPMX19_02810 D-threonate 4-phosphate dehydrogenase 0.34 MPMX19_04320 Sec-independent protein translocase protein TatC — —
Variovorax sp. SCN45 0.38 GFF5368 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.36 GFF5364 Twin-arginine translocation protein TatC — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF1297 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.36 GFF1301 Twin-arginine translocation protein TatC — —
Bosea sp. OAE506 0.34 ABIE41_RS20430 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.30 ABIE41_RS15005 twin-arginine translocase subunit TatC — —
Caulobacter crescentus NA1000 Δfur 0.33 CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase 0.25 CCNA_02080 Sec-independent protein translocase protein tatC — —
Caulobacter crescentus NA1000 0.33 CCNA_01758 4-hydroxythreonine-4-phosphate dehydrogenase 0.25 CCNA_02080 Sec-independent protein translocase protein tatC — —
Acidovorax sp. GW101-3H11 0.32 Ac3H11_4747 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) 0.43 Ac3H11_4742 Twin-arginine translocation protein TatC — —
Rhodopseudomonas palustris CGA009 0.32 TX73_015855 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.30 TX73_014745 twin-arginine translocase subunit TatC — —
Rhodospirillum rubrum S1H 0.31 Rru_A0432 4-hydroxythreonine-4-phosphate dehydrogenase (NCBI) 0.34 Rru_A1771 Sec-independent periplasmic protein translocase (NCBI) low > 58
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS18320 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.21 CA265_RS18375 twin-arginine translocase subunit TatC — —
Brevundimonas sp. GW460-12-10-14-LB2 0.29 A4249_RS06755 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.25 A4249_RS05665 twin-arginine translocase subunit TatC — —
Dinoroseobacter shibae DFL-12 0.29 Dshi_2444 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) 0.25 Dshi_1345 Sec-independent protein translocase, TatC subunit (RefSeq) — —
Synechococcus elongatus PCC 7942 0.28 Synpcc7942_0804 pdxA 4-hydroxythreonine-4-phosphate dehydrogenase 0.21 Synpcc7942_1578 tatC Sec-independent protein translocase TatC — —
Desulfovibrio vulgaris Miyazaki F 0.28 DvMF_0837 4-hydroxythreonine-4-phosphate dehydrogenase (RefSeq) 0.36 DvMF_3123 Sec-independent protein translocase, TatC subunit (RefSeq) — —
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS14540 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 0.21 HMPREF1078_RS03715 twin-arginine translocase subunit TatC low > 61

Not shown: 3 genomes with orthologs for HER17_RS03455 only; 59 genomes with orthologs for HER17_RS20585 only