Conservation of cofitness between HER17_RS10320 and HER17_RS20380 in Pectobacterium carotovorum WPP14

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS10320 flavin reductase 1.0 HER17_RS20380 phosphomethylpyrimidine synthase ThiC 0.67 11
Serratia liquefaciens MT49 0.56 IAI46_09030 pyrimidine utilization flavin reductase protein F 0.87 IAI46_01320 phosphomethylpyrimidine synthase ThiC low > 86
Enterobacter sp. TBS_079 0.54 MPMX20_01694 FMN reductase (NADH) RutF 0.84 MPMX20_00217 Phosphomethylpyrimidine synthase low > 85
Enterobacter asburiae PDN3 0.54 EX28DRAFT_1919 pyrimidine utilization flavin reductase protein F 0.83 EX28DRAFT_4536 phosphomethylpyrimidine synthase low > 76
Escherichia coli ECOR27 0.53 NOLOHH_21540 rutF malonic semialdehyde reductase 0.83 NOLOHH_05520 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli BW25113 0.53 b1007 b1007 orf, hypothetical protein (VIMSS) 0.83 b3994 thiC thiamine biosynthesis protein ThiC (NCBI) low > 76
Escherichia fergusonii Becca 0.53 EFB2_03073 FMN reductase (NADH) RutF 0.83 EFB2_04617 Phosphomethylpyrimidine synthase low > 86
Escherichia coli Nissle 1917 0.53 ECOLIN_RS26450 NADH-dependent FMN reductase RutF 0.83 ECOLIN_RS23040 phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC98 0.53 JDDGAC_08250 rutF malonic semialdehyde reductase 0.83 JDDGAC_17000 thiC phosphomethylpyrimidine synthase ThiC low > 86
Escherichia coli ECOR38 0.53 HEPCGN_23500 rutF malonic semialdehyde reductase 0.83 HEPCGN_12010 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC99 0.53 KEDOAH_23105 rutF malonic semialdehyde reductase 0.83 KEDOAH_14785 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC62 0.53 BNILDI_19705 rutF malonic semialdehyde reductase 0.83 BNILDI_06005 thiC phosphomethylpyrimidine synthase ThiC low > 75
Escherichia coli BL21 0.53 ECD_01010 flavin:NADH reductase 0.83 ECD_03871 phosphomethylpyrimidine synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_02659 FMN reductase (NADH) RutF 0.83 OHPLBJKB_04056 Phosphomethylpyrimidine synthase low > 73
Escherichia coli ECRC102 0.53 NIAGMN_23695 rutF pyrimidine utilization flavin reductase protein F 0.83 NIAGMN_11125 thiC phosphomethylpyrimidine synthase ThiC — —
Escherichia coli ECRC101 0.53 MCAODC_24025 rutF pyrimidine utilization flavin reductase protein F 0.83 MCAODC_03875 thiC phosphomethylpyrimidine synthase ThiC low > 87
Escherichia coli ECRC100 0.53 OKFHMN_04640 rutF pyrimidine utilization flavin reductase protein F 0.83 OKFHMN_13375 thiC phosphomethylpyrimidine synthase ThiC low > 80
Pantoea sp. MT58 0.52 IAI47_12530 pyrimidine utilization flavin reductase protein F 0.83 IAI47_18085 phosphomethylpyrimidine synthase ThiC low > 76
Variovorax sp. SCN45 0.52 GFF3714 FMN reductase (NADH) RutF (EC 1.5.1.42) 0.61 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) — —
Klebsiella michiganensis M5al 0.51 BWI76_RS10755 pyrimidine utilization flavin reductase protein F 0.82 BWI76_RS01555 phosphomethylpyrimidine synthase ThiC low > 92
Pseudomonas syringae pv. syringae B728a 0.51 Psyr_0995 Flavin reductase-like protein 0.69 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.51 Psyr_0995 Flavin reductase-like protein 0.69 Psyr_0544 hydroxymethylpyrimidine synthase low > 86
Agrobacterium fabrum C58 0.48 Atu2495 flavoprotein oxidoreductase 0.61 Atu2569 thiamine biosynthesis protein low > 89
Alteromonas macleodii MIT1002 0.47 MIT1002_03463 FMN reductase (NADH) RutF 0.75 MIT1002_00097 Phosphomethylpyrimidine synthase low > 70
Burkholderia phytofirmans PsJN 0.44 BPHYT_RS25005 FMN reductase 0.67 BPHYT_RS13220 phosphomethylpyrimidine synthase low > 109
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS07445 FMN reductase 0.67 HSERO_RS02120 phosphomethylpyrimidine synthase ThiC low > 78
Paraburkholderia sabiae LMG 24235 0.37 QEN71_RS07485 4-hydroxyphenylacetate 3-monooxygenase, reductase component 0.66 QEN71_RS05480 phosphomethylpyrimidine synthase ThiC low > 153
Pseudomonas fluorescens GW456-L13 0.37 PfGW456L13_3748 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) 0.69 PfGW456L13_187 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF3275 4-hydroxyphenylacetate 3-monooxygenase, reductase component (EC 1.6.8.-) 0.83 GFF4198 Thiamin biosynthesis protein ThiC low > 78
Paraburkholderia bryophila 376MFSha3.1 0.36 H281DRAFT_01660 4-hydroxyphenylacetate 3-monooxygenase reductase component (EC 1.14.13.3) 0.66 H281DRAFT_00395 hydroxymethylpyrimidine synthase low > 103
Bosea sp. OAE506 0.34 ABIE41_RS13660 flavin reductase family protein 0.57 ABIE41_RS02770 phosphomethylpyrimidine synthase ThiC low > 77
Paraburkholderia graminis OAS925 0.32 ABIE53_004540 flavin reductase (NADH) 0.67 ABIE53_002857 phosphomethylpyrimidine synthase low > 113
Sinorhizobium meliloti 1021 0.29 SMc00514 monooxygenase 0.62 SM_b20615 thiamine biosynthesis protein ThiC low > 103
Magnetospirillum magneticum AMB-1 0.27 AMB_RS12970 flavin reductase 0.62 AMB_RS01125 phosphomethylpyrimidine synthase — —
Rhodopseudomonas palustris CGA009 0.24 TX73_013510 flavin reductase family protein 0.58 TX73_018540 phosphomethylpyrimidine synthase ThiC low > 86
Pseudomonas sp. RS175 0.24 PFR28_02021 FMN reductase (NADH) RutF 0.69 PFR28_05091 Phosphomethylpyrimidine synthase low > 88
Cupriavidus basilensis FW507-4G11 0.23 RR42_RS31995 flavin reductase 0.66 RR42_RS01290 thiamine biosynthesis protein ThiC low > 128
Caulobacter crescentus NA1000 0.21 CCNA_02358 FMN reductase 0.60 CCNA_02109 thiamine biosynthesis protein thiC low > 66
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_02358 FMN reductase 0.60 CCNA_02109 thiamine biosynthesis protein thiC low > 67
Pseudomonas simiae WCS417 0.21 PS417_17920 nitrilotriacetate monooxygenase 0.69 PS417_02355 thiamine biosynthesis protein ThiC low > 88
Azospirillum brasilense Sp245 0.21 AZOBR_RS20045 flavin reductase 0.62 AZOBR_RS07940 phosphomethylpyrimidine synthase low > 97
Rhodospirillum rubrum S1H 0.20 Rru_A1841 Flavin reductase-like, FMN-binding (NCBI) 0.57 Rru_A2008 Thiamine biosynthesis protein ThiC (NCBI) low > 58
Castellaniella sp019104865 MT123 0.20 ABCV34_RS06740 flavin reductase family protein 0.68 ABCV34_RS10825 phosphomethylpyrimidine synthase ThiC 0.30 14
Dechlorosoma suillum PS 0.19 Dsui_1004 conserved protein of DIM6/NTAB family 0.67 Dsui_0422 thiamine biosynthesis protein ThiC — —
Acidovorax sp. GW101-3H11 0.16 Ac3H11_4854 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) 0.61 Ac3H11_2027 Hydroxymethylpyrimidine phosphate synthase ThiC (EC 4.1.99.17) low > 79

Not shown: 1 genomes with orthologs for HER17_RS10320 only; 49 genomes with orthologs for HER17_RS20380 only