Conservation of cofitness between HER17_RS15240 and HER17_RS17400 in Pectobacterium carotovorum WPP14

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 1.0 HER17_RS17400 4-oxalocrotonate tautomerase family protein 0.57 14
Dickeya dianthicola ME23 0.98 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.77 DZA65_RS21820 4-oxalocrotonate tautomerase family protein — —
Dickeya dadantii 3937 0.98 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.78 DDA3937_RS00585 4-oxalocrotonate tautomerase family protein — —
Dickeya dianthicola 67-19 0.97 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.77 HGI48_RS20805 4-oxalocrotonate tautomerase family protein — —
Rahnella sp. WP5 0.95 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.82 EX31_RS05430 4-oxalocrotonate tautomerase family protein low > 89
Serratia liquefaciens MT49 0.95 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.85 IAI46_24315 4-oxalocrotonate tautomerase family protein low > 86
Pseudomonas sp. S08-1 0.63 OH686_09325 rRNA large subunit m3Psi methyltransferase RlmH 0.56 OH686_23130 2-hydroxymuconate tautomerase-like protein low > 80
Pseudomonas putida KT2440 0.61 PP_4808 23S rRNA m3psi1915 methyltransferase 0.53 PP_2504 putative tautomerase K2 low > 96
Pseudomonas sp. RS175 0.61 PFR28_03869 Ribosomal RNA large subunit methyltransferase H 0.54 PFR28_01794 putative tautomerase low > 88
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_15305 50S rRNA methyltransferase 0.56 AO356_24990 4-oxalocrotonate tautomerase low > 104
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_4996 LSU m3Psi1915 methyltransferase RlmH 0.56 Pf6N2E2_687 4-oxalocrotonate tautomerase (EC 5.3.2.-) low > 103
Pseudomonas fluorescens FW300-N1B4 0.61 Pf1N1B4_2691 LSU m3Psi1915 methyltransferase RlmH 0.57 Pf1N1B4_1651 4-oxalocrotonate tautomerase (EC 5.3.2.-) — —
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_06480 50S rRNA methyltransferase 0.57 AO353_11945 4-oxalocrotonate tautomerase low > 101
Pseudomonas simiae WCS417 0.61 PS417_24730 50S rRNA methyltransferase 0.57 PS417_01360 4-oxalocrotonate tautomerase — —
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_1359 LSU m3Psi1915 methyltransferase RlmH 0.56 PfGW456L13_390 4-oxalocrotonate tautomerase (EC 5.3.2.-) low > 87
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS24420 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.56 QEN71_RS30440 4-oxalocrotonate tautomerase family protein — —
Paraburkholderia graminis OAS925 0.50 ABIE53_001541 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.55 ABIE53_004218 4-oxalocrotonate tautomerase — —
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS09055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.60 ABZR86_RS21070 4-oxalocrotonate tautomerase family protein — —
Lysobacter sp. OAE881 0.50 ABIE51_RS06755 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.53 ABIE51_RS10290 4-oxalocrotonate tautomerase family protein — —
Burkholderia phytofirmans PsJN 0.50 BPHYT_RS06385 ribosomal RNA large subunit methyltransferase H 0.53 BPHYT_RS20620 4-oxalocrotonate tautomerase — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_04517 23S rRNA (pseudouridine1915-N3)-methyltransferase 0.54 H281DRAFT_03081 4-oxalocrotonate tautomerase — —
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS04710 50S rRNA methyltransferase 0.60 RR42_RS11545 4-oxalocrotonate tautomerase — —
Variovorax sp. OAS795 0.48 ABID97_RS16715 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.56 ABID97_RS03050 4-oxalocrotonate tautomerase family protein — —
Castellaniella sp019104865 MT123 0.45 ABCV34_RS02530 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.79 ABCV34_RS08830 4-oxalocrotonate tautomerase family protein — —
Acidovorax sp. GW101-3H11 0.45 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.65 Ac3H11_2374 4-oxalocrotonate tautomerase (EC 5.3.2.-) — —
Dechlorosoma suillum PS 0.45 Dsui_0451 hypothetical protein 0.70 Dsui_1856 4-oxalocrotonate tautomerase family enzyme — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS17055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.57 ABZR88_RS05775 4-oxalocrotonate tautomerase family protein low > 71
Sinorhizobium meliloti 1021 0.28 SMc03781 rRNA large subunit methyltransferase 0.53 SM_b20209 hypothetical protein low > 103
Rhizobium sp. OAE497 0.27 ABIE40_RS18965 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.58 ABIE40_RS25335 4-oxalocrotonate tautomerase family protein low > 107
Pedobacter sp. GW460-11-11-14-LB5 0.25 CA265_RS16470 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.58 CA265_RS13720 4-oxalocrotonate tautomerase low > 88
Caulobacter crescentus NA1000 Δfur 0.25 CCNA_03546 rRNA large subunit methyltransferase 0.65 CCNA_03070 4-oxalocrotonate tautomerase low > 67
Caulobacter crescentus NA1000 0.25 CCNA_03546 rRNA large subunit methyltransferase 0.65 CCNA_03070 4-oxalocrotonate tautomerase low > 66
Desulfovibrio vulgaris Miyazaki F 0.21 DvMF_0845 protein of unknown function DUF163 (RefSeq) 0.74 DvMF_1969 4-oxalocrotonate tautomerase family enzyme (RefSeq) low > 51

Not shown: 64 genomes with orthologs for HER17_RS15240 only; 1 genomes with orthologs for HER17_RS17400 only