Conservation of cofitness between HER17_RS12330 and HER17_RS15900 in Pectobacterium carotovorum WPP14

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12330 LysR family transcriptional regulator 1.0 HER17_RS15900 MFS transporter 0.94 6
Dickeya dianthicola ME23 0.73 DZA65_RS09965 LysR family transcriptional regulator 0.83 DZA65_RS05960 MFS transporter low > 75
Dickeya dadantii 3937 0.72 DDA3937_RS09645 LysR family transcriptional regulator 0.85 DDA3937_RS05575 MFS transporter low > 74
Dickeya dianthicola 67-19 0.72 HGI48_RS09655 LysR family transcriptional regulator 0.83 HGI48_RS05635 MFS transporter low > 71
Pseudomonas putida KT2440 0.23 PP_4522 Transcriptional regulator, LysR family 0.52 PP_0484 transporter of an unknown substrate low > 96
Pseudomonas sp. RS175 0.23 PFR28_00779 hypothetical protein 0.53 PFR28_03973 Inner membrane transport protein YajR low > 88
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_524 Transcriptional regulator GbuR 0.55 Pf1N1B4_2612 Putative transport protein low > 87
Pseudomonas fluorescens SBW25 0.23 PFLU_RS22115 LysR family transcriptional regulator 0.54 PFLU_RS27020 MFS transporter low > 109
Pseudomonas simiae WCS417 0.23 PS417_20175 LysR family transcriptional regulator 0.54 PS417_25390 MFS transporter low > 88
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS22115 LysR family transcriptional regulator 0.54 PFLU_RS27020 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2654 Transcriptional regulator GbuR 0.52 Pf6N2E2_4889 Putative transport protein low > 103
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_04090 LysR family transcriptional regulator 0.52 AO356_14790 MFS transporter low > 104
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4434 Transcriptional regulator GbuR 0.55 PfGW456L13_1284 Putative transport protein low > 87
Pseudomonas fluorescens FW300-N2E3 0.22 AO353_18405 LysR family transcriptional regulator 0.54 AO353_06850 MFS transporter low > 101
Pseudomonas sp. S08-1 0.22 OH686_11350 Transcriptional regulator GbuR 0.51 OH686_15500 Inner membrane transport protein YajR 0.61 9
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS05085 LysR family transcriptional regulator 0.32 BPHYT_RS02975 membrane protein low > 109
Klebsiella michiganensis M5al 0.21 BWI76_RS21930 LysR family transcriptional regulator 0.74 BWI76_RS06415 MFS transporter — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.20 Psyr_0677 transcriptional regulator, LysR family 0.56 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.20 Psyr_0677 transcriptional regulator, LysR family 0.56 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Shewanella amazonensis SB2B 0.20 Sama_1630 LysR family transcriptional regulator (RefSeq) 0.38 Sama_0515 transporter, putative (RefSeq) low > 62
Paraburkholderia graminis OAS925 0.20 ABIE53_001288 DNA-binding transcriptional LysR family regulator 0.35 ABIE53_000733 MFS family permease low > 113
Paraburkholderia bryophila 376MFSha3.1 0.20 H281DRAFT_00177 transcriptional regulator, LysR family 0.34 H281DRAFT_01912 Predicted arabinose efflux permease, MFS family — —
Paraburkholderia sabiae LMG 24235 0.20 QEN71_RS03395 LysR family transcriptional regulator 0.35 QEN71_RS01830 MFS transporter low > 153
Acinetobacter radioresistens SK82 0.20 MPMX26_01249 HTH-type transcriptional regulator HdfR 0.38 MPMX26_02889 Inner membrane transport protein YajR low > 36
Rahnella sp. WP5 0.19 EX31_RS06810 LysR family transcriptional regulator 0.78 EX31_RS22195 MFS transporter low > 89
Serratia liquefaciens MT49 0.19 IAI46_08230 LysR family transcriptional regulator 0.82 IAI46_04960 MFS transporter low > 86
Acidovorax sp. GW101-3H11 0.19 Ac3H11_4344 Regulatory protein, LysR:LysR, substrate-binding 0.27 Ac3H11_4384 putative transport protein low > 79
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS02460 LysR family transcriptional regulator 0.33 RR42_RS02150 membrane protein low > 128
Ralstonia sp. UNC404CL21Col 0.18 ABZR87_RS16045 LysR family transcriptional regulator 0.34 ABZR87_RS07125 MFS transporter low > 80
Herbaspirillum seropedicae SmR1 0.16 HSERO_RS08550 LysR family transcriptional regulator 0.33 HSERO_RS19800 membrane protein low > 78
Ralstonia solanacearum GMI1000 0.15 RS_RS24690 LysR family transcriptional regulator 0.36 RS_RS02085 MFS transporter low > 80
Alteromonas macleodii MIT1002 0.15 MIT1002_01262 DNA-binding transcriptional activator XapR 0.26 MIT1002_00180 Inner membrane transport protein YajR low > 70
Shewanella loihica PV-4 0.14 Shew_3174 LysR family transcriptional regulator (RefSeq) 0.36 Shew_0534 major facilitator transporter (RefSeq) low > 60
Ralstonia solanacearum PSI07 0.14 RPSI07_RS07380 LysR family transcriptional regulator 0.35 RPSI07_RS22060 MFS transporter low > 81

Not shown: 4 genomes with orthologs for HER17_RS12330 only; 32 genomes with orthologs for HER17_RS15900 only