Conservation of cofitness between HER17_RS00965 and HER17_RS15900 in Pectobacterium carotovorum WPP14

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00965 HTH-type transcriptional repressor FabR 1.0 HER17_RS15900 MFS transporter 0.87 13
Dickeya dianthicola ME23 0.93 DZA65_RS21440 HTH-type transcriptional repressor FabR 0.83 DZA65_RS05960 MFS transporter low > 75
Dickeya dianthicola 67-19 0.93 HGI48_RS20395 HTH-type transcriptional repressor FabR 0.83 HGI48_RS05635 MFS transporter low > 71
Dickeya dadantii 3937 0.93 DDA3937_RS00980 HTH-type transcriptional repressor FabR 0.85 DDA3937_RS05575 MFS transporter low > 74
Escherichia coli BL21 0.92 ECD_03848 transcriptional repressor of fabA and fabB 0.73 ECD_00375 putative transporter low > 61
Escherichia coli ECRC101 0.92 MCAODC_04045 fabR HTH-type transcriptional repressor FabR 0.73 MCAODC_27610 yajR Inner membrane transport protein YajR low > 87
Escherichia fergusonii Becca 0.92 EFB2_04647 HTH-type transcriptional repressor FabR 0.74 EFB2_03630 Inner membrane transport protein YajR low > 86
Escherichia coli ECOR38 0.92 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR 0.73 HEPCGN_07015 yajR Inner membrane transport protein YajR low > 87
Escherichia coli ECRC62 0.92 BNILDI_05835 fabR HTH-type transcriptional repressor FabR 0.73 BNILDI_22750 yajR Inner membrane transport protein YajR low > 75
Escherichia coli ECRC100 0.92 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR 0.73 OKFHMN_08385 yajR Inner membrane transport protein YajR low > 80
Enterobacter sp. TBS_079 0.92 MPMX20_04517 HTH-type transcriptional repressor FabR 0.75 MPMX20_01018 Inner membrane transport protein YajR low > 85
Escherichia coli ECRC102 0.92 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR 0.73 NIAGMN_06440 yajR Inner membrane transport protein YajR
Escherichia coli Nissle 1917 0.92 ECOLIN_RS22890 HTH-type transcriptional repressor FabR 0.74 ECOLIN_RS02570 MFS transporter low > 55
Escherichia coli ECRC98 0.92 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR 0.73 JDDGAC_12040 yajR Inner membrane transport protein YajR low > 86
Enterobacter asburiae PDN3 0.92 EX28DRAFT_4426 transcriptional regulator, TetR family 0.75 EX28DRAFT_2544 Arabinose efflux permease low > 76
Escherichia coli BW25113 0.92 b3963 fabR DNA-binding transcriptional repressor (RefSeq) 0.74 b0427 yajR putative transport protein (VIMSS) low > 76
Escherichia coli ECRC99 0.92 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR 0.73 KEDOAH_19580 yajR Inner membrane transport protein YajR
Escherichia coli ECOR27 0.92 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR 0.73 NOLOHH_01335 yajR Inner membrane transport protein YajR low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.92 OHPLBJKB_04087 HTH-type transcriptional repressor FabR 0.73 OHPLBJKB_03249 Inner membrane transport protein YajR low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.75 GFF4338 Putative transport protein low > 78
Klebsiella michiganensis M5al 0.91 BWI76_RS00875 DNA-binding transcriptional regulator FabR 0.74 BWI76_RS06415 MFS transporter
Serratia liquefaciens MT49 0.91 IAI46_24465 HTH-type transcriptional repressor FabR 0.82 IAI46_04960 MFS transporter low > 86
Rahnella sp. WP5 0.90 EX31_RS14160 HTH-type transcriptional repressor FabR 0.78 EX31_RS22195 MFS transporter low > 89
Pantoea sp. MT58 0.90 IAI47_00940 HTH-type transcriptional repressor FabR 0.78 IAI47_14705 MFS transporter low > 76
Erwinia tracheiphila SCR3 0.90 LU632_RS19580 fabR HTH-type transcriptional repressor FabR 0.76 LU632_RS18400 MFS transporter low > 74
Shewanella amazonensis SB2B 0.65 Sama_0192 DNA-binding transcriptional repressor FabR (RefSeq) 0.38 Sama_0515 transporter, putative (RefSeq) low > 62
Shewanella oneidensis MR-1 0.65 SO0198 transcriptional regulator, TetR family (NCBI ptt file) 0.37 SO4029 transporter, putative (NCBI ptt file) 0.32 20
Shewanella sp. ANA-3 0.65 Shewana3_0178 DNA-binding transcriptional repressor FabR (RefSeq) 0.37 Shewana3_3591 major facilitator transporter (RefSeq) low > 73
Shewanella loihica PV-4 0.65 Shew_0137 DNA-binding transcriptional repressor FabR (RefSeq) 0.36 Shew_0534 major facilitator transporter (RefSeq) low > 60
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_1831 transcriptional regulator, TetR family 0.30 B158DRAFT_0886 Arabinose efflux permease low > 40
Marinobacter adhaerens HP15 0.56 HP15_2045 DNA-binding transcriptional repressor FabR 0.39 HP15_407 transporter, major facilitator family low > 73
Alteromonas macleodii MIT1002 0.55 MIT1002_03371 HTH-type transcriptional repressor FabR 0.26 MIT1002_00180 Inner membrane transport protein YajR low > 70
Acinetobacter radioresistens SK82 0.35 MPMX26_01029 HTH-type transcriptional repressor FabR 0.38 MPMX26_02889 Inner membrane transport protein YajR low > 36
Pseudomonas sp. S08-1 0.31 OH686_16690 Transcriptional regulator, AcrR family 0.51 OH686_15500 Inner membrane transport protein YajR low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_4450 transcriptional regulator, TetR family 0.56 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_4450 transcriptional regulator, TetR family 0.56 Psyr_4519 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.55 PfGW456L13_1284 Putative transport protein low > 87
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.55 Pf1N1B4_2612 Putative transport protein low > 87
Pseudomonas putida KT2440 0.27 PP_4859 Transcriptional regulator, TetR family 0.52 PP_0484 transporter of an unknown substrate low > 96
Pseudomonas fluorescens FW300-N2E3 0.27 AO353_13415 TetR family transcriptional regulator 0.54 AO353_06850 MFS transporter low > 101
Pseudomonas sp. RS175 0.27 PFR28_05164 HTH-type transcriptional repressor FabR 0.53 PFR28_03973 Inner membrane transport protein YajR low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_08445 TetR family transcriptional regulator 0.52 AO356_14790 MFS transporter low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family 0.52 Pf6N2E2_4889 Putative transport protein low > 103
Pseudomonas simiae WCS417 0.27 PS417_02720 TetR family transcriptional regulator 0.54 PS417_25390 MFS transporter low > 88
Pseudomonas fluorescens SBW25 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.54 PFLU_RS27020 MFS transporter low > 109
Pseudomonas fluorescens SBW25-INTG 0.26 PFLU_RS02790 TetR family transcriptional regulator 0.54 PFLU_RS27020 MFS transporter low > 109
Paraburkholderia graminis OAS925 0.22 ABIE53_002363 AcrR family transcriptional regulator 0.35 ABIE53_000733 MFS family permease low > 113
Burkholderia phytofirmans PsJN 0.21 BPHYT_RS11410 TetR family transcriptional regulator 0.32 BPHYT_RS02975 membrane protein low > 109

Not shown: 3 genomes with orthologs for HER17_RS00965 only; 18 genomes with orthologs for HER17_RS15900 only