Conservation of cofitness between HER17_RS11985 and HER17_RS14535 in Pectobacterium carotovorum WPP14

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS11985 ABC transporter ATP-binding protein 1.0 HER17_RS14535 GDP-L-fucose synthase 0.70 16
Dickeya dianthicola ME23 0.84 DZA65_RS13370 ABC transporter ATP-binding protein 0.22 DZA65_RS19745 GDP-L-fucose synthase low > 75
Dickeya dianthicola 67-19 0.84 HGI48_RS12905 ABC transporter ATP-binding protein 0.22 HGI48_RS18610 GDP-L-fucose synthase low > 71
Dickeya dadantii 3937 0.83 DDA3937_RS12835 ABC transporter ATP-binding protein 0.23 DDA3937_RS18680 GDP-L-fucose synthase low > 74
Escherichia coli ECOR38 0.76 HEPCGN_23245 uup ABC transporter ATP-binding protein 0.77 HEPCGN_03050 fcl GDP-L-fucose synthase low > 87
Enterobacter asburiae PDN3 0.76 EX28DRAFT_1994 ATPase components of ABC transporters with duplicated ATPase domains 0.78 EX28DRAFT_0503 Nucleoside-diphosphate-sugar epimerases low > 76
Escherichia fergusonii Becca 0.75 EFB2_03122 ABC transporter ATP-binding protein uup 0.77 EFB2_01802 GDP-L-fucose synthase low > 86
Escherichia coli Nissle 1917 0.75 ECOLIN_RS04985 ABC transporter ATP-binding protein 0.77 ECOLIN_RS12090 GDP-L-fucose synthase — —
Escherichia coli ECRC98 0.74 JDDGAC_08885 uup ABC transporter ATP-binding protein 0.77 JDDGAC_28460 fcl GDP-L-fucose synthase low > 86
Enterobacter sp. TBS_079 0.74 MPMX20_01600 ABC transporter ATP-binding protein uup 0.77 MPMX20_03034 GDP-L-fucose synthase low > 85
Escherichia coli ECRC101 0.74 MCAODC_24665 uup ABC transporter ATP-binding protein 0.77 MCAODC_20590 fcl GDP-L-fucose synthase low > 87
Escherichia coli ECRC99 0.74 KEDOAH_22460 uup ABC transporter ATP-binding protein 0.77 KEDOAH_03800 fcl GDP-L-fucose synthase — —
Escherichia coli ECRC102 0.74 NIAGMN_02995 uup ABC transporter ATP-binding protein 0.77 NIAGMN_22295 fcl GDP-L-fucose synthase — —
Escherichia coli ECRC100 0.74 OKFHMN_05275 uup ABC transporter ATP-binding protein 0.77 OKFHMN_24350 fcl GDP-L-fucose synthase low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF3240 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.77 GFF3876 GDP-L-fucose synthetase (EC 1.1.1.271) low > 78
Escherichia coli ECRC62 0.74 BNILDI_19995 uup ABC transporter ATP-binding protein 0.77 BNILDI_14590 fcl GDP-L-fucose synthase low > 75
Escherichia coli BL21 0.74 ECD_00953 replication regulatory ABC-F family DNA-binding ATPase 0.77 ECD_01958 bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase low > 61
Escherichia coli ECOR27 0.74 NOLOHH_21830 uup ABC transporter ATP-binding protein 0.77 NOLOHH_15680 fcl GDP-L-fucose synthase low > 75
Escherichia coli BW25113 0.74 b0949 uup fused predicted transporter subunits of ABC superfamily: ATP-binding components (NCBI) 0.77 b2052 fcl bifunctional GDP-fucose synthetase: GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase (NCBI) low > 76
Rhodanobacter denitrificans MT42 0.47 LRK55_RS11860 ATP-binding cassette domain-containing protein 0.51 LRK55_RS03655 GDP-L-fucose synthase low > 63
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.66 PFLU_RS17885 GDP-L-fucose synthase low > 109
Pseudomonas fluorescens SBW25 0.45 PFLU_RS07635 ATP-binding cassette domain-containing protein 0.66 PFLU_RS17885 GDP-L-fucose synthase low > 109
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS24715 ATP-binding cassette domain-containing protein 0.55 QEN71_RS26355 GDP-L-fucose synthase low > 153
Cupriavidus basilensis FW507-4G11 0.43 RR42_RS14685 ABC transporter ATP-binding protein 0.58 RR42_RS21005 GDP-L-fucose synthase low > 128
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS06980 ABC transporter ATP-binding protein 0.43 HSERO_RS22065 EpiA low > 78
Pseudomonas stutzeri RCH2 0.43 Psest_1845 ATPase components of ABC transporters with duplicated ATPase domains 0.69 Psest_1819 Nucleoside-diphosphate-sugar epimerases low > 67
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_00263 ATP-binding cassette, subfamily F, uup 0.53 H281DRAFT_04777 GDP-L-fucose synthase low > 103
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS05925 ABC transporter ATP-binding protein 0.53 BPHYT_RS04005 GDP-L-fucose synthase low > 109
Paraburkholderia graminis OAS925 0.41 ABIE53_001391 ATP-binding cassette subfamily F protein uup 0.53 ABIE53_000941 GDP-L-fucose synthase low > 113
Desulfovibrio vulgaris Hildenborough JW710 0.39 DVU1979 ABC transporter, ATP-binding protein (TIGR) 0.56 DVU0090 wcaG GDP-fucose synthetase (TIGR) — —
Variovorax sp. OAS795 0.39 ABID97_RS00005 ATP-binding cassette domain-containing protein 0.61 ABID97_RS19130 GDP-L-fucose synthase low > 91
Variovorax sp. SCN45 0.39 GFF3812 Bis-ABC ATPase Uup 0.57 GFF60 GDP-L-fucose synthetase (EC 1.1.1.271) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.38 GFF1747 COG0488: ATPase components of ABC transporters with duplicated ATPase domains 0.68 GFF1841 GDP-L-fucose synthetase (EC 1.1.1.271) low > 90
Dechlorosoma suillum PS 0.38 Dsui_1883 ATPase component of ABC transporters with duplicated ATPase domain 0.70 Dsui_0086 nucleoside-diphosphate-sugar epimerase low > 51
Desulfovibrio vulgaris Miyazaki F 0.38 DvMF_3061 ABC transporter related (RefSeq) 0.55 DvMF_2695 NAD-dependent epimerase/dehydratase (RefSeq) low > 51
Castellaniella sp019104865 MT123 0.35 ABCV34_RS09725 ATP-binding cassette domain-containing protein 0.67 ABCV34_RS12930 GDP-L-fucose synthase — —
Magnetospirillum magneticum AMB-1 0.34 AMB_RS04385 elongation factor 3 0.54 AMB_RS00820 GDP-L-fucose synthase 0.60 30
Azospirillum brasilense Sp245 0.34 AZOBR_RS12260 elongation factor 3 0.55 AZOBR_RS03370 GDP-L-fucose synthase low > 97
Azospirillum sp. SherDot2 0.33 MPMX19_01666 ABC transporter ATP-binding protein uup 0.54 MPMX19_05629 GDP-L-fucose synthase low > 112
Rhodospirillum rubrum S1H 0.33 Rru_A1013 ABC transporter component (NCBI) 0.52 Rru_A0254 NAD-dependent epimerase/dehydratase (NCBI) low > 58
Agrobacterium fabrum C58 0.31 Atu2716 ABC transporter, nucleotide binding/ATPase protein 0.49 Atu4790 GDP-fucose synthetase low > 89
Dinoroseobacter shibae DFL-12 0.31 Dshi_1714 ABC transporter related (RefSeq) 0.51 Dshi_4142 NAD-dependent epimerase/dehydratase (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.30 PGA1_c11290 putative holdfast attachment protein C 0.63 PGA1_65p00300 GDP-L-fucose synthetase Fcl — —
Brevundimonas sp. GW460-12-10-14-LB2 0.25 A4249_RS10210 ABC-F family ATP-binding cassette domain-containing protein 0.25 A4249_RS13020 NAD-dependent epimerase/dehydratase family protein low > 48

Not shown: 42 genomes with orthologs for HER17_RS11985 only; 14 genomes with orthologs for HER17_RS14535 only