Conservation of cofitness between HER17_RS15910 and HER17_RS12030 in Pectobacterium carotovorum WPP14

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15910 2-dehydropantoate 2-reductase 1.0 HER17_RS12030 aspartate/tyrosine/aromatic aminotransferase 0.92 5
Dickeya dianthicola ME23 0.79 DZA65_RS05940 2-dehydropantoate 2-reductase 0.85 DZA65_RS13450 aspartate/tyrosine/aromatic aminotransferase 0.79 30
Dickeya dadantii 3937 0.79 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.85 DDA3937_RS12915 aspartate/tyrosine/aromatic aminotransferase low > 74
Dickeya dianthicola 67-19 0.79 HGI48_RS05615 2-dehydropantoate 2-reductase 0.86 HGI48_RS12990 aspartate/tyrosine/aromatic aminotransferase 0.78 33
Serratia liquefaciens MT49 0.69 IAI46_04950 2-dehydropantoate 2-reductase 0.88 IAI46_08750 aspartate/tyrosine/aromatic aminotransferase low > 86
Enterobacter sp. TBS_079 0.63 MPMX20_01016 2-dehydropantoate 2-reductase 0.86 MPMX20_01586 Aspartate aminotransferase low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS06405 2-dehydropantoate 2-reductase 0.86 BWI76_RS09870 aromatic amino acid aminotransferase low > 92
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.85 EX28DRAFT_2008 Aspartate/tyrosine/aromatic aminotransferase low > 76
Rahnella sp. WP5 0.63 EX31_RS22180 2-dehydropantoate 2-reductase 0.86 EX31_RS18145 aspartate/tyrosine/aromatic aminotransferase low > 89
Escherichia coli ECOR38 0.63 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.87 HEPCGN_23140 aspC aspartate transaminase low > 87
Escherichia coli BL21 0.63 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.87 ECD_00932 aspartate aminotransferase, PLP-dependent — —
Escherichia fergusonii Becca 0.63 EFB2_03632 2-dehydropantoate 2-reductase 0.86 EFB2_03136 Aspartate aminotransferase low > 86
Escherichia coli BW25113 0.63 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.87 b0928 aspC aspartate aminotransferase, PLP-dependent (NCBI) 0.17 66
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.86 ECOLIN_RS04910 aspartate transaminase — —
Escherichia coli ECOR27 0.62 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.87 NOLOHH_21940 aspC aspartate transaminase low > 75
Escherichia coli ECRC62 0.62 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.87 BNILDI_20195 aspC aspartate transaminase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.87 OHPLBJKB_02738 Aspartate aminotransferase low > 73
Escherichia coli ECRC102 0.61 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.86 NIAGMN_03105 aspC aspartate transaminase — —
Escherichia coli ECRC99 0.61 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.86 KEDOAH_22350 aspC aspartate transaminase — —
Escherichia coli ECRC101 0.61 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.86 MCAODC_24775 aspC aspartate transaminase low > 87
Escherichia coli ECRC100 0.61 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.86 OKFHMN_05385 aspC aspartate transaminase low > 80
Escherichia coli ECRC98 0.61 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.86 JDDGAC_08995 aspC aspartate transaminase low > 86
Pantoea sp. MT58 0.61 IAI47_14715 2-dehydropantoate 2-reductase 0.84 IAI47_12765 aspartate/tyrosine/aromatic aminotransferase low > 76
Erwinia tracheiphila SCR3 0.58 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.83 LU632_RS09905 aspartate/tyrosine/aromatic aminotransferase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4336 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.85 GFF3685 Aspartate aminotransferase (EC 2.6.1.1) 0.47 30
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_11730 2-dehydropantoate 2-reductase 0.61 CSW01_06530 aromatic amino acid aminotransferase low > 62
Shewanella sp. ANA-3 0.25 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.64 Shewana3_2121 aromatic amino acid aminotransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.24 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.64 SO2350 aspC-1 aspartate aminotransferase (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.24 OH686_08220 2-dehydropantoate 2-reductase 0.45 OH686_21225 Aspartate aminotransferase or Aromatic-amino-acid aminotransferase low > 80
Shewanella amazonensis SB2B 0.22 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.64 Sama_1805 aromatic amino acid aminotransferase (RefSeq) — —
Pseudomonas simiae WCS417 0.21 PS417_22515 2-dehydropantoate 2-reductase 0.46 PS417_19910 aromatic amino acid aminotransferase low > 88
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.46 PfGW456L13_4396 tyrosine aminotransferase (EC 2.6.1.57) (from data) low > 87
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_17955 2-dehydropantoate 2-reductase 0.47 AO356_03985 L-phenylalanine transaminase (EC 2.6.1.57) (from data) low > 104
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.47 Pf6N2E2_2632 tyrosine aminotransferase (EC 2.6.1.57) (from data) low > 103
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.66 Shew_1999 aromatic amino acid aminotransferase (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.46 PFLU_RS21880 aspartate/tyrosine/aromatic aminotransferase low > 109
Alteromonas macleodii MIT1002 0.20 MIT1002_01217 2-dehydropantoate 2-reductase 0.45 MIT1002_02269 Aspartate aminotransferase — —
Pseudomonas sp. RS175 0.20 PFR28_03426 2-dehydropantoate 2-reductase 0.46 PFR28_00800 Aspartate aminotransferase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_4088 ketopantoate reductase 0.45 Psyr_1973 Aspartate transaminase low > 86
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_4088 ketopantoate reductase 0.45 Psyr_1973 Aspartate transaminase low > 86
Marinobacter adhaerens HP15 0.19 HP15_1312 2-dehydropantoate 2-reductase 0.45 HP15_858 phenylalanine aminotransferase (EC 2.6.1.57) (from data) low > 73
Dinoroseobacter shibae DFL-12 0.11 Dshi_1216 2-dehydropantoate 2-reductase (RefSeq) 0.35 Dshi_0145 Aspartate transaminase (RefSeq) — —
Rhodanobacter denitrificans MT42 0.10 LRK55_RS02820 2-dehydropantoate 2-reductase 0.45 LRK55_RS10325 amino acid aminotransferase low > 63
Rhodanobacter denitrificans FW104-10B01 0.10 LRK54_RS03070 2-dehydropantoate 2-reductase 0.46 LRK54_RS10685 aspartate/tyrosine/aromatic aminotransferase low > 59
Rhodanobacter sp. FW510-T8 0.09 OKGIIK_09940 panE 2-dehydropantoate 2-reductase 0.47 OKGIIK_13195 Aminotransferase low > 52

Not shown: 15 genomes with orthologs for HER17_RS15910 only; 6 genomes with orthologs for HER17_RS12030 only