Conservation of cofitness between HER17_RS05050 and HER17_RS09415 in Pectobacterium carotovorum WPP14

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS05050 recombination regulator RecX 1.0 HER17_RS09415 MFS transporter 0.75 5
Dickeya dadantii 3937 0.56 DDA3937_RS16240 recombination regulator RecX 0.33 DDA3937_RS03650 MFS transporter low > 74
Serratia liquefaciens MT49 0.54 IAI46_03845 recombination regulator RecX 0.36 IAI46_04120 MFS transporter low > 86
Rahnella sp. WP5 0.49 EX31_RS07795 recombination regulator RecX 0.36 EX31_RS21215 MFS transporter low > 89
Escherichia coli ECRC99 0.47 KEDOAH_07425 recX recombination regulator RecX 0.31 KEDOAH_00710 ydhP Inner membrane transport protein YdhP — —
Escherichia coli ECOR27 0.47 NOLOHH_12550 recX recombination regulator RecX 0.31 NOLOHH_17920 ydhP Inner membrane transport protein YdhP low > 75
Escherichia coli Nissle 1917 0.47 ECOLIN_RS15055 recombination regulator RecX 0.31 ECOLIN_RS09235 MFS transporter low > 55
Escherichia coli ECRC101 0.47 MCAODC_11235 recX recombination regulator RecX 0.31 MCAODC_18010 ydhP Inner membrane transport protein YdhP low > 87
Escherichia coli BL21 0.47 ECD_02548 regulatory protein for RecA 0.31 ECD_01627 putative MFS transporter, inner membrane protein low > 61
Escherichia coli ECRC102 0.47 NIAGMN_18480 recX recombination regulator RecX 0.31 NIAGMN_00665 ydhP Inner membrane transport protein YdhP — —
Escherichia coli ECRC98 0.47 JDDGAC_24375 recX recombination regulator RecX 0.31 JDDGAC_01990 ydhP Inner membrane transport protein YdhP low > 86
Escherichia coli BW25113 0.47 b2698 recX RecA regulator RecX (NCBI) 0.31 b1657 ydhP predicted transporter (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.47 OHPLBJKB_01036 Regulatory protein RecX 0.31 OHPLBJKB_02068 Inner membrane transport protein YdhP low > 73
Escherichia coli ECRC100 0.47 OKFHMN_20710 recX recombination regulator RecX 0.31 OKFHMN_27400 ydhP Inner membrane transport protein YdhP low > 80
Escherichia coli ECOR38 0.47 HEPCGN_19905 recX recombination regulator RecX 0.31 HEPCGN_05785 ydhP Inner membrane transport protein YdhP low > 87
Escherichia fergusonii Becca 0.47 EFB2_01226 Regulatory protein RecX 0.30 EFB2_02336 Inner membrane transport protein YdhP low > 86
Enterobacter sp. TBS_079 0.47 MPMX20_03579 Regulatory protein RecX 0.35 MPMX20_00893 Inner membrane transport protein YdhP low > 85
Escherichia coli ECRC62 0.47 BNILDI_11110 recX recombination regulator RecX 0.31 BNILDI_16710 ydhP Inner membrane transport protein YdhP low > 75
Enterobacter asburiae PDN3 0.46 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria 0.34 EX28DRAFT_2686 Arabinose efflux permease low > 76
Pantoea sp. MT58 0.45 IAI47_04305 regulatory protein RecX 0.38 IAI47_03850 MFS transporter low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF4692 Regulatory protein RecX 0.35 GFF4040 Putative drug efflux protein low > 78
Klebsiella michiganensis M5al 0.43 BWI76_RS22175 recombination regulator RecX 0.35 BWI76_RS05420 MFS transporter — —
Erwinia tracheiphila SCR3 0.40 LU632_RS15730 recombination regulator RecX 0.31 LU632_RS24930 MFS transporter low > 74
Pseudomonas sp. S08-1 0.26 OH686_18210 Regulatory protein RecX 0.35 OH686_06195 Uncharacterized MFS-type transporter low > 80
Lysobacter sp. OAE881 0.24 ABIE51_RS07805 recombination regulator RecX 0.37 ABIE51_RS06085 MFS transporter — —
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_4667 Regulatory protein RecX 0.38 PfGW456L13_4577 Putative sugar transport protein low > 87
Pseudomonas simiae WCS417 0.24 PS417_05820 recombinase RecX 0.37 PS417_06790 arabinose transporter permease low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS05890 recombination regulator RecX 0.37 PFLU_RS06850 MFS transporter — —
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS05890 recombination regulator RecX 0.37 PFLU_RS06850 MFS transporter low > 109
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_05665 recombinase RecX 0.37 AO356_04855 arabinose transporter permease — —
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16810 recombinase RecX 0.38 AO353_17325 arabinose transporter permease low > 101
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_3144 Regulatory protein RecX 0.39 Pf1N1B4_3251 Putative sugar transport protein — —
Pseudomonas sp. RS175 0.23 PFR28_00473 Regulatory protein RecX 0.37 PFR28_00636 Inner membrane transport protein YdhP low > 88
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_2992 Regulatory protein RecX 0.37 Pf6N2E2_2819 Putative sugar transport protein low > 103
Pseudomonas stutzeri RCH2 0.23 Psest_2871 Uncharacterized protein conserved in bacteria 0.24 Psest_1374 Arabinose efflux permease — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_1379 Regulatory protein RecX 0.36 Psyr_4052 General substrate transporter:Major facilitator superfamily — —
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_1379 Regulatory protein RecX 0.36 Psyr_4052 General substrate transporter:Major facilitator superfamily low > 86
Pseudomonas putida KT2440 0.22 PP_1630 Regulatory protein RecX 0.37 PP_2535 putative inner membrane transport protein low > 96
Shewanella amazonensis SB2B 0.21 Sama_1047 hypothetical protein (RefSeq) 0.33 Sama_2390 putative transmembrane efflux transmembrane protein (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.21 MPMX26_01307 Regulatory protein RecX 0.32 MPMX26_03004 Inner membrane transport protein YdhP low > 36
Xanthomonas campestris pv. campestris strain 8004 0.19 Xcc-8004.3108.1 Regulatory protein RecX 0.39 Xcc-8004.1806.1 MFS transporter low > 74
Ralstonia sp. UNC404CL21Col 0.17 ABZR87_RS07970 recombination regulator RecX 0.30 ABZR87_RS00250 MFS transporter low > 80
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS03275 regulatory protein RecX 0.43 HSERO_RS14740 efflux transmembrane protein low > 78
Ralstonia solanacearum GMI1000 0.17 RS_RS02765 regulatory protein RecX 0.31 RS_RS05745 MFS transporter low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.16 GFF2501 Regulatory protein RecX 0.34 GFF2876 Putative drug efflux protein — —

Not shown: 8 genomes with orthologs for HER17_RS05050 only; 30 genomes with orthologs for HER17_RS09415 only