Conservation of cofitness between HER17_RS15910 and HER17_RS05375 in Pectobacterium carotovorum WPP14

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS15910 2-dehydropantoate 2-reductase 1.0 HER17_RS05375 3-deoxy-7-phosphoheptulonate synthase 0.89 9
Dickeya dianthicola ME23 0.79 DZA65_RS05940 2-dehydropantoate 2-reductase 0.88 DZA65_RS17355 3-deoxy-7-phosphoheptulonate synthase — —
Dickeya dadantii 3937 0.79 DDA3937_RS05555 2-dehydropantoate 2-reductase 0.89 DDA3937_RS16140 3-deoxy-7-phosphoheptulonate synthase — —
Dickeya dianthicola 67-19 0.79 HGI48_RS05615 2-dehydropantoate 2-reductase 0.88 HGI48_RS16260 3-deoxy-7-phosphoheptulonate synthase — —
Serratia liquefaciens MT49 0.69 IAI46_04950 2-dehydropantoate 2-reductase 0.85 IAI46_03955 3-deoxy-7-phosphoheptulonate synthase low > 86
Enterobacter sp. TBS_079 0.63 MPMX20_01016 2-dehydropantoate 2-reductase 0.80 MPMX20_03469 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 85
Klebsiella michiganensis M5al 0.63 BWI76_RS06405 2-dehydropantoate 2-reductase 0.80 BWI76_RS21480 phospho-2-dehydro-3-deoxyheptonate aldolase low > 92
Enterobacter asburiae PDN3 0.63 EX28DRAFT_2546 2-dehydropantoate 2-reductase 0.80 EX28DRAFT_2702 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC 2.5.1.54) low > 76
Rahnella sp. WP5 0.63 EX31_RS22180 2-dehydropantoate 2-reductase 0.84 EX31_RS07595 3-deoxy-7-phosphoheptulonate synthase low > 89
Escherichia coli ECOR38 0.63 HEPCGN_07025 panE 2-dehydropantoate 2-reductase 0.81 HEPCGN_20335 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 87
Escherichia coli BL21 0.63 ECD_00373 2-dehydropantoate reductase, NADPH-specific 0.81 ECD_02490 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible low > 61
Escherichia coli BW25113 0.63 b0425 panE 2-dehydropantoate 2-reductase (NCBI) 0.81 b2601 aroF 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible (NCBI) low > 76
Escherichia fergusonii Becca 0.63 EFB2_03632 2-dehydropantoate 2-reductase 0.80 EFB2_01291 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 86
Escherichia coli Nissle 1917 0.63 ECOLIN_RS02560 2-dehydropantoate 2-reductase 0.81 ECOLIN_RS14705 3-deoxy-7-phosphoheptulonate synthase AroF low > 55
Escherichia coli ECOR27 0.62 NOLOHH_01345 panE 2-dehydropantoate 2-reductase 0.81 NOLOHH_12890 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.62 OHPLBJKB_03251 2-dehydropantoate 2-reductase 0.81 OHPLBJKB_01107 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 73
Escherichia coli ECRC62 0.62 BNILDI_22760 panE 2-dehydropantoate 2-reductase 0.81 BNILDI_11695 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 75
Escherichia coli ECRC102 0.61 NIAGMN_06450 panE 2-dehydropantoate 2-reductase 0.81 NIAGMN_18985 aroF 3-deoxy-7-phosphoheptulonate synthase AroF — —
Escherichia coli ECRC99 0.61 KEDOAH_19570 panE 2-dehydropantoate 2-reductase 0.81 KEDOAH_07005 aroF 3-deoxy-7-phosphoheptulonate synthase AroF — —
Escherichia coli ECRC100 0.61 OKFHMN_08395 panE 2-dehydropantoate 2-reductase 0.81 OKFHMN_21215 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 80
Escherichia coli ECRC101 0.61 MCAODC_27620 panE 2-dehydropantoate 2-reductase 0.81 MCAODC_11745 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 87
Escherichia coli ECRC98 0.61 JDDGAC_12050 panE 2-dehydropantoate 2-reductase 0.81 JDDGAC_24880 aroF 3-deoxy-7-phosphoheptulonate synthase AroF low > 86
Pantoea sp. MT58 0.61 IAI47_14715 2-dehydropantoate 2-reductase 0.82 IAI47_04400 3-deoxy-7-phosphoheptulonate synthase low > 76
Erwinia tracheiphila SCR3 0.58 LU632_RS18455 panE 2-dehydropantoate 2-reductase 0.79 LU632_RS15450 3-deoxy-7-phosphoheptulonate synthase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.55 GFF4336 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.80 GFF4176 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 78
Vibrio cholerae E7946 ATCC 55056 0.34 CSW01_11730 2-dehydropantoate 2-reductase 0.72 CSW01_03635 3-deoxy-7-phosphoheptulonate synthase low > 62
Pseudomonas stutzeri RCH2 0.25 Psest_1140 2-dehydropantoate 2-reductase 0.59 Psest_2331 phospho-2-dehydro-3-deoxyheptonate aldolase low > 67
Shewanella sp. ANA-3 0.25 Shewana3_0780 2-dehydropantoate 2-reductase (RefSeq) 0.67 Shewana3_3013 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) 0.48 40
Shewanella oneidensis MR-1 0.24 SO3817 panE 2-dehydropantoate 2-reductase (NCBI ptt file) 0.66 SO1361 aroF phospho-2-dehydro-3-deoxyheptonate aldolase, tyr-sensitive (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.24 OH686_08220 2-dehydropantoate 2-reductase 0.60 OH686_01760 3-deoxy-7-phosphoheptulonate synthase low > 80
Shewanella amazonensis SB2B 0.22 Sama_2559 2-dehydropantoate 2-reductase (RefSeq) 0.64 Sama_0893 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) — —
Pseudomonas simiae WCS417 0.21 PS417_22515 2-dehydropantoate 2-reductase 0.61 PS417_08430 phospho-2-dehydro-3-deoxyheptonate aldolase low > 88
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_1839 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.61 PfGW456L13_2224 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 87
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_17955 2-dehydropantoate 2-reductase 0.60 AO356_03200 phospho-2-dehydro-3-deoxyheptonate aldolase low > 104
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_03645 2-dehydropantoate 2-reductase 0.60 AO353_19030 phospho-2-dehydro-3-deoxyheptonate aldolase low > 101
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5521 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.61 Pf6N2E2_2470 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 103
Pseudomonas fluorescens FW300-N1B4 0.21 Pf1N1B4_651 2-dehydropantoate 2-reductase (EC 1.1.1.169) 0.61 Pf1N1B4_289 2-keto-3-deoxy-D-arabino-heptulosonate-7- phosphate synthase I alpha (EC 2.5.1.54) low > 87
Shewanella loihica PV-4 0.21 Shew_2895 2-dehydropantoate 2-reductase (RefSeq) 0.66 Shew_1067 phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) low > 60
Pseudomonas fluorescens SBW25 0.21 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.61 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS24155 putative 2-dehydropantoate 2-reductase 0.61 PFLU_RS08380 3-deoxy-7-phosphoheptulonate synthase low > 109
Alteromonas macleodii MIT1002 0.20 MIT1002_01217 2-dehydropantoate 2-reductase 0.62 MIT1002_01314 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive 0.60 62
Pseudomonas sp. RS175 0.20 PFR28_03426 2-dehydropantoate 2-reductase 0.60 PFR28_00962 Phospho-2-dehydro-3-deoxyheptonate aldolase, Tyr-sensitive low > 88
Pseudomonas putida KT2440 0.20 PP_1351 putative 2-dehydropantoate 2-reductase 0.59 PP_2324 tyr-sensitive phospho-2-dehydro-3-deoxyheptonate aldolase 0.27 23
Pseudomonas syringae pv. syringae B728a ΔmexB 0.19 Psyr_4088 ketopantoate reductase 0.61 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a 0.19 Psyr_4088 ketopantoate reductase 0.61 Psyr_2073 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase low > 86
Marinobacter adhaerens HP15 0.19 HP15_1312 2-dehydropantoate 2-reductase 0.58 HP15_1814 phospho-2-dehydro-3-heoxyheptonate aldolase low > 73

Not shown: 15 genomes with orthologs for HER17_RS15910 only; 4 genomes with orthologs for HER17_RS05375 only