Conservation of cofitness between HER17_RS12930 and HER17_RS01710 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS12930 microcin C ABC transporter permease 1.0 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) 0.53 13
Dickeya dianthicola 67-19 0.87 HGI48_RS09220 ABC transporter permease subunit 0.93 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) low > 71
Dickeya dadantii 3937 0.87 DDA3937_RS09180 ABC transporter permease subunit 0.92 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Dickeya dianthicola ME23 0.85 DZA65_RS09525 ABC transporter permease subunit 0.92 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Serratia liquefaciens MT49 0.79 IAI46_17325 ABC transporter permease subunit 0.91 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli BW25113 0.76 b2179 yejE predicted oligopeptide transporter subunit (NCBI) 0.88 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli Nissle 1917 0.76 ECOLIN_RS12740 ABC transporter permease 0.88 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR27 0.76 NOLOHH_14955 yejE Inner membrane ABC transporter permease protein YejE 0.88 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.76 OHPLBJKB_01530 Inner membrane ABC transporter permease protein YejE 0.88 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 73
Escherichia coli BL21 0.76 ECD_02109 microcin C ABC transporter permease 0.88 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] low > 61
Escherichia coli ECRC62 0.76 BNILDI_13875 yejE Inner membrane ABC transporter permease protein YejE 0.88 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.76 GFF3757 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.88 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Escherichia fergusonii Becca 0.76 EFB2_01677 Inner membrane ABC transporter permease protein YejE 0.88 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECRC100 0.76 OKFHMN_23380 yejE Inner membrane ABC transporter permease protein YejE 0.88 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Escherichia coli ECRC101 0.76 MCAODC_14430 yejE Inner membrane ABC transporter permease protein YejE 0.88 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC99 0.76 KEDOAH_04805 yejE Inner membrane ABC transporter permease protein YejE 0.88 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC98 0.76 JDDGAC_27340 yejE Inner membrane ABC transporter permease protein YejE 0.88 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECOR38 0.76 HEPCGN_22645 yejE Inner membrane ABC transporter permease protein YejE 0.88 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC102 0.76 NIAGMN_21145 yejE Inner membrane ABC transporter permease protein YejE 0.88 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Klebsiella michiganensis M5al 0.75 BWI76_RS19790 putative binding-protein-dependent transporter 0.87 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Erwinia tracheiphila SCR3 0.75 LU632_RS17575 microcin C ABC transporter permease 0.81 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 74
Enterobacter sp. TBS_079 0.74 MPMX20_03145 Inner membrane ABC transporter permease protein YejE 0.86 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Enterobacter asburiae PDN3 0.74 EX28DRAFT_0382 ABC-type uncharacterized transport system, permease component 0.87 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Rahnella sp. WP5 0.73 EX31_RS19140 ABC transporter permease subunit 0.86 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Vibrio cholerae E7946 ATCC 55056 0.72 CSW01_17175 ABC transporter permease 0.80 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) low > 62
Pantoea sp. MT58 0.69 IAI47_06605 ABC transporter permease subunit 0.80 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Marinobacter adhaerens HP15 0.67 HP15_1809 peptide ABC transporter, permease protein 0.36 HP15_3498 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas sp. S08-1 0.65 OH686_03610 ABC transporter, permease protein 2 0.32 OH686_11060 phosphoenolpyruvate carboxykinase (ATP) low > 80
Pseudomonas stutzeri RCH2 0.65 Psest_2065 ABC-type uncharacterized transport system, permease component 0.32 Psest_3988 phosphoenolpyruvate carboxykinase (ATP) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.32 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas syringae pv. syringae B728a 0.64 Psyr_1756 Binding-protein-dependent transport systems inner membrane component 0.32 Psyr_0168 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Pseudomonas sp. RS175 0.63 PFR28_01547 Inner membrane ABC transporter permease protein YejE 0.32 PFR28_04874 Phosphoenolpyruvate carboxykinase (ATP) low > 88
Pseudomonas fluorescens SBW25 0.63 PFLU_RS12885 ABC transporter permease 0.32 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens SBW25-INTG 0.63 PFLU_RS12885 ABC transporter permease 0.32 PFLU_RS01320 phosphoenolpyruvate carboxykinase low > 109
Pseudomonas fluorescens FW300-N2E2 0.62 Pf6N2E2_582 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.31 Pf6N2E2_3899 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 103
Rhizobium sp. OAE497 0.62 ABIE40_RS00625 ABC transporter permease 0.40 ABIE40_RS19415 phosphoenolpyruvate carboxykinase 0.35 61
Pseudomonas fluorescens GW456-L13 0.62 PfGW456L13_3345 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.32 PfGW456L13_420 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 87
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_24455 ABC transporter permease 0.31 AO356_10140 phosphoenolpyruvate carboxykinase [ATP] low > 104
Pseudomonas fluorescens FW300-N2E3 0.62 AO353_23465 ABC transporter permease 0.32 AO353_11775 phosphoenolpyruvate carboxykinase [ATP] low > 101
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_4591 Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) 0.33 Pf1N1B4_1779 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) — —
Bosea sp. OAE506 0.61 ABIE41_RS23970 ABC transporter permease 0.41 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Pseudomonas simiae WCS417 0.61 PS417_12195 ABC transporter permease 0.33 PS417_01210 hypothetical protein low > 88
Rhodopseudomonas palustris CGA009 0.60 TX73_019115 ABC transporter permease 0.41 TX73_001865 phosphoenolpyruvate carboxykinase — —
Agrobacterium fabrum C58 0.58 Atu0189 ABC transporter, membrane spanning protein (peptide) 0.43 Atu0035 phosphoenolpyruvate carboxykinase low > 89
Sinorhizobium meliloti 1021 0.57 SMc02830 ABC transporter permease 0.42 SMc02562 phosphoenolpyruvate carboxykinase — —
Dinoroseobacter shibae DFL-12 0.55 Dshi_0657 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.39 Dshi_0213 Phosphoenolpyruvate carboxykinase (ATP) (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.53 PGA1_c30160 ABC transporter permease protein 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase low > 62

Not shown: 21 genomes with orthologs for HER17_RS12930 only; 17 genomes with orthologs for HER17_RS01710 only