Conservation of cofitness between HER17_RS00495 and HER17_RS00505 in Pectobacterium carotovorum WPP14

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pectobacterium carotovorum WPP14 1.0 HER17_RS00495 branched-chain amino acid ABC transporter substrate-binding protein 1.0 HER17_RS00505 high-affinity branched-chain amino acid ABC transporter permease LivM 0.98 3
Dickeya dadantii 3937 0.91 DDA3937_RS00660 branched-chain amino acid ABC transporter substrate-binding protein 0.80 DDA3937_RS00670 high-affinity branched-chain amino acid ABC transporter permease LivM 0.36 51
Rahnella sp. WP5 0.88 EX31_RS14805 branched-chain amino acid ABC transporter substrate-binding protein 0.87 EX31_RS14795 high-affinity branched-chain amino acid ABC transporter permease LivM low > 89
Dickeya dianthicola 67-19 0.88 HGI48_RS20730 high-affinity branched-chain amino acid ABC transporter substrate-binding protein 0.80 HGI48_RS20720 high-affinity branched-chain amino acid ABC transporter permease LivM 0.81 8
Dickeya dianthicola ME23 0.88 DZA65_RS21740 branched-chain amino acid ABC transporter substrate-binding protein 0.80 DZA65_RS21730 high-affinity branched-chain amino acid ABC transporter permease LivM low > 75
Serratia liquefaciens MT49 0.87 IAI46_00960 branched-chain amino acid ABC transporter substrate-binding protein 0.83 IAI46_00970 high-affinity branched-chain amino acid ABC transporter permease LivM low > 86
Erwinia tracheiphila SCR3 0.82 LU632_RS19255 branched-chain amino acid ABC transporter substrate-binding protein 0.83 LU632_RS19245 high-affinity branched-chain amino acid ABC transporter permease LivM low > 74
Escherichia coli ECOR27 0.79 NOLOHH_08535 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 NOLOHH_08545 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli ECRC99 0.79 KEDOAH_11400 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 KEDOAH_11390 livM branched chain amino acid ABC transporter permease LivM
Escherichia coli BW25113 0.79 b3458 livK leucine transporter subunit (NCBI) 0.78 b3456 livM leucine/isoleucine/valine transporter subunit (NCBI) 0.88 2
Escherichia coli HS(pFamp)R (ATCC 700891) 0.79 OHPLBJKB_00245 Leucine-specific-binding protein 0.78 OHPLBJKB_00247 hypothetical protein low > 73
Escherichia coli ECRC62 0.79 BNILDI_02970 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 BNILDI_02960 livM branched chain amino acid ABC transporter permease LivM low > 75
Escherichia coli ECRC102 0.79 NIAGMN_14510 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 NIAGMN_14520 livM branched chain amino acid ABC transporter permease LivM
Escherichia coli ECRC98 0.79 JDDGAC_20370 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 JDDGAC_20380 livM branched chain amino acid ABC transporter permease LivM low > 86
Escherichia coli ECRC100 0.79 OKFHMN_16740 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 OKFHMN_16750 livM branched chain amino acid ABC transporter permease LivM low > 80
Escherichia coli ECRC101 0.79 MCAODC_07270 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 MCAODC_07280 livM branched chain amino acid ABC transporter permease LivM low > 87
Escherichia fergusonii Becca 0.79 EFB2_00364 Leucine-specific-binding protein 0.78 EFB2_00366 hypothetical protein low > 86
Escherichia coli ECOR38 0.79 HEPCGN_15560 livK high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 HEPCGN_15570 livM branched chain amino acid ABC transporter permease LivM low > 87
Escherichia coli Nissle 1917 0.79 ECOLIN_RS19775 high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK 0.78 ECOLIN_RS19765 branched chain amino acid ABC transporter permease LivM low > 55
Enterobacter asburiae PDN3 0.79 EX28DRAFT_4290 ABC-type branched-chain amino acid transport systems, periplasmic component 0.78 EX28DRAFT_4288 ABC-type branched-chain amino acid transport system, permease component 0.83 3
Enterobacter sp. TBS_079 0.78 MPMX20_04334 Leucine-specific-binding protein 0.79 MPMX20_04332 hypothetical protein 0.20 16
Escherichia coli BL21 0.78 ECD_03307 leucine transporter subunit 0.78 ECD_03305 branched-chain amino acid ABC transporter permease low > 61
Pantoea sp. MT58 0.78 IAI47_01565 branched-chain amino acid ABC transporter substrate-binding protein 0.79 IAI47_01575 high-affinity branched-chain amino acid ABC transporter permease LivM 0.27 45
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.77 GFF545 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.79 GFF550 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) low > 78
Klebsiella michiganensis M5al 0.77 BWI76_RS26350 branched chain amino acid ABC transporter substrate-binding protein 0.80 BWI76_RS26340 branched-chain amino acid ABC transporter permease low > 92
Pseudomonas syringae pv. syringae B728a 0.62 Psyr_3845 L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein 0.57 Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.62 Psyr_3845 L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein 0.57 Psyr_3847 L-valine ABC transporter membrane protein / L-isoleucine ABC transporter membrane protein / L-leucine ABC transporter membrane protein low > 86
Pseudomonas stutzeri RCH2 0.61 Psest_1312 ABC-type branched-chain amino acid transport systems, periplasmic component 0.57 Psest_1310 ABC-type branched-chain amino acid transport system, permease component 0.28 6
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_05320 leucine ABC transporter substrate-binding protein 0.56 AO356_05330 leucine/isoleucine/valine transporter permease subunit 0.88 2
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17125 leucine ABC transporter substrate-binding protein 0.55 AO353_17115 leucine/isoleucine/valine transporter permease subunit 0.73 1
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2921 ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) 0.56 Pf6N2E2_2924 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, permease component 2 LivM (from data) 0.82 1
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_3218 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.58 Pf1N1B4_3216 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) 0.40 3
Pseudomonas fluorescens GW456-L13 0.60 PfGW456L13_4606 High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) 0.57 PfGW456L13_4609 Branched-chain amino acid transport system permease protein LivM (TC 3.A.1.4.1) 0.84 2
Pseudomonas sp. S08-1 0.60 OH686_04605 Branched-chain amino acid ABC transporter, substrate-binding protein LivJ 0.58 OH686_04615 Branched-chain amino acid ABC transporter, permease protein LivM 0.95 2
Pseudomonas sp. RS175 0.59 PFR28_00540 Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein 0.55 PFR28_00538 hypothetical protein 0.93 1
Pseudomonas putida KT2440 0.59 PP_1141 branched-chain amino acids ABC transporter - periplasmic leucine binding subunit 0.56 PP_1139 branched chain amino acid transporter - permease subunit 0.77 2
Pseudomonas fluorescens SBW25 0.59 PFLU_RS06645 branched-chain amino acid ABC transporter substrate-binding protein 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM 0.92 1
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS06645 branched-chain amino acid ABC transporter substrate-binding protein 0.55 PFLU_RS06635 high-affinity branched-chain amino acid ABC transporter permease LivM 0.91 2
Pseudomonas simiae WCS417 0.59 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) 0.54 PS417_06605 leucine/isoleucine/valine transporter permease subunit 0.50 1
Marinobacter adhaerens HP15 0.58 HP15_3055 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein 0.51 HP15_3057 leucine/isoleucine/valine transporter permease subunit 0.90 1
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS08270 amino acid ABC transporter substrate-binding protein 0.56 HSERO_RS08280 leucine/isoleucine/valine transporter permease subunit 0.74 1
Cupriavidus basilensis FW507-4G11 0.51 RR42_RS14425 leucine ABC transporter substrate-binding protein 0.51 RR42_RS14415 leucine/isoleucine/valine transporter permease subunit 0.83 2
Castellaniella sp019104865 MT123 0.47 ABCV34_RS03585 branched-chain amino acid ABC transporter substrate-binding protein 0.52 ABCV34_RS03625 high-affinity branched-chain amino acid ABC transporter permease LivM 0.97 8
Bosea sp. OAE506 0.35 ABIE41_RS13610 branched-chain amino acid ABC transporter substrate-binding protein 0.19 ABIE41_RS20030 branched-chain amino acid ABC transporter permease low > 77
Variovorax sp. OAS795 0.30 ABID97_RS27585 branched-chain amino acid ABC transporter substrate-binding protein 0.42 ABID97_RS27575 high-affinity branched-chain amino acid ABC transporter permease LivM low > 91
Paraburkholderia graminis OAS925 0.25 ABIE53_000461 branched-chain amino acid transport system substrate-binding protein 0.28 ABIE53_003284 branched-chain amino acid transport system permease protein 0.81 1
Burkholderia phytofirmans PsJN 0.24 BPHYT_RS01885 branched-chain amino acid ABC transporter substrate-binding protein 0.28 BPHYT_RS31745 ABC transporter ATP-binding protein low > 109

Not shown: 23 genomes with orthologs for HER17_RS00495 only; 0 genomes with orthologs for HER17_RS00505 only