Conservation of cofitness between HEPCGN_04800 and HEPCGN_00745 in Escherichia coli ECOR38

45 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR38 1.0 HEPCGN_04800 yobA CopC domain-containing protein YobA 1.0 HEPCGN_00745 ybdL methionine-oxo-acid transaminase 0.57 11
Escherichia coli BW25113 0.99 b1841 yobA hypothetical protein (NCBI) 0.99 b0600 ybdL putative aminotransferase (NCBI) low > 76
Escherichia coli BL21 0.99 ECD_01812 CopC family protein 0.99 ECD_00568 methionine aminotransferase, PLP-dependent low > 61
Escherichia coli Nissle 1917 0.99 ECOLIN_RS10250 CopC domain-containing protein YobA 0.99 ECOLIN_RS03295 methionine-oxo-acid transaminase — —
Escherichia fergusonii Becca 0.99 EFB2_02103 Protein YobA 0.99 EFB2_03491 Methionine aminotransferase low > 86
Escherichia coli ECRC102 0.98 NIAGMN_01660 yobA CopC domain-containing protein YobA 0.99 NIAGMN_05590 ybdL methionine-oxo-acid transaminase — —
Escherichia coli ECRC100 0.98 OKFHMN_26400 yobA CopC domain-containing protein YobA 0.99 OKFHMN_07535 ybdL methionine-oxo-acid transaminase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01890 Protein YobA 0.99 OHPLBJKB_03105 Methionine aminotransferase low > 73
Escherichia coli ECRC98 0.98 JDDGAC_00975 yobA CopC domain-containing protein YobA 0.99 JDDGAC_11180 ybdL methionine-oxo-acid transaminase low > 86
Escherichia coli ECRC101 0.98 MCAODC_19005 yobA CopC domain-containing protein YobA 0.99 MCAODC_26750 ybdL methionine-oxo-acid transaminase low > 87
Escherichia coli ECRC99 0.98 KEDOAH_01705 yobA CopC domain-containing protein YobA 0.99 KEDOAH_20435 ybdL methionine-oxo-acid transaminase — —
Escherichia coli ECOR27 0.98 NOLOHH_16910 yobA CopC domain-containing protein YobA 0.99 NOLOHH_23910 ybdL methionine-oxo-acid transaminase low > 75
Escherichia coli ECRC62 0.98 BNILDI_15705 yobA CopC domain-containing protein YobA 0.99 BNILDI_21920 ybdL methionine-oxo-acid transaminase low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.70 GFF1620 Copper resistance protein CopC 0.88 GFF4508 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Enterobacter asburiae PDN3 0.56 EX28DRAFT_0713 Uncharacterized protein, homolog of Cu resistance protein CopC 0.87 EX28DRAFT_2353 Aspartate/tyrosine/aromatic aminotransferase low > 76
Enterobacter sp. TBS_079 0.52 MPMX20_02748 Protein YobA 0.89 MPMX20_01269 Methionine aminotransferase low > 85
Klebsiella michiganensis M5al 0.51 BWI76_RS18060 hypothetical protein 0.86 BWI76_RS07920 methionine aminotransferase low > 92
Serratia liquefaciens MT49 0.45 IAI46_10005 CopC domain-containing protein YobA 0.79 IAI46_04300 pyridoxal phosphate-dependent aminotransferase — —
Rahnella sp. WP5 0.39 EX31_RS24770 copper homeostasis periplasmic binding protein CopC 0.75 EX31_RS21065 pyridoxal phosphate-dependent aminotransferase low > 89
Dickeya dadantii 3937 0.33 DDA3937_RS10160 copper homeostasis periplasmic binding protein CopC 0.79 DDA3937_RS16625 pyridoxal phosphate-dependent aminotransferase 0.46 2
Dickeya dianthicola ME23 0.32 DZA65_RS10605 copper homeostasis periplasmic binding protein CopC 0.80 DZA65_RS17785 pyridoxal phosphate-dependent aminotransferase — —
Rhizobium sp. OAE497 0.31 ABIE40_RS22750 copper homeostasis periplasmic binding protein CopC 0.20 ABIE40_RS21035 pyridoxal phosphate-dependent aminotransferase low > 107
Dickeya dianthicola 67-19 0.31 HGI48_RS10190 copper homeostasis periplasmic binding protein CopC 0.80 HGI48_RS16695 pyridoxal phosphate-dependent aminotransferase low > 71
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_26590 hypothetical protein 0.52 AO353_15915 aminotransferase low > 101
Burkholderia phytofirmans PsJN 0.30 BPHYT_RS16425 copper resistance protein 0.49 BPHYT_RS06770 aminotransferase — —
Pseudomonas simiae WCS417 0.30 PS417_17345 hypothetical protein 0.51 PS417_23120 aminotransferase low > 88
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.50 PFLU_RS24775 pyridoxal phosphate-dependent aminotransferase low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS19270 copper homeostasis periplasmic binding protein CopC 0.50 PFLU_RS24775 pyridoxal phosphate-dependent aminotransferase low > 109
Paraburkholderia sabiae LMG 24235 0.28 QEN71_RS02285 copper homeostasis periplasmic binding protein CopC 0.49 QEN71_RS24010 pyridoxal phosphate-dependent aminotransferase low > 153
Paraburkholderia graminis OAS925 0.27 ABIE53_005709 methionine-rich copper-binding protein CopC 0.49 ABIE53_001620 methionine aminotransferase low > 113
Castellaniella sp019104865 MT123 0.27 ABCV34_RS03900 copper homeostasis periplasmic binding protein CopC 0.46 ABCV34_RS11735 methionine aminotransferase low > 48
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_1495 Copper resistance protein CopC 0.51 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_1495 Copper resistance protein CopC 0.51 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme low > 86
Pseudomonas fluorescens GW456-L13 0.25 PfGW456L13_3976 Copper resistance protein C precursor 0.51 PfGW456L13_4856 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Ralstonia solanacearum PSI07 0.25 RPSI07_RS02370 copper resistance protein C 0.51 RPSI07_RS14585 pyridoxal phosphate-dependent aminotransferase low > 81
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_46 Copper resistance protein C precursor 0.52 Pf1N1B4_849 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Cupriavidus basilensis FW507-4G11 0.24 RR42_RS35360 copper resistance protein CopC 0.50 RR42_RS05770 aminotransferase low > 128
Acinetobacter radioresistens SK82 0.23 MPMX26_03122 Protein YobA 0.44 MPMX26_02954 Methionine aminotransferase low > 36
Magnetospirillum magneticum AMB-1 0.22 AMB_RS01165 hypothetical protein 0.35 AMB_RS03565 pyridoxal phosphate-dependent aminotransferase low > 64
Ralstonia solanacearum IBSBF1503 0.21 RALBFv3_RS20875 copper resistance protein C 0.51 RALBFv3_RS02730 pyridoxal phosphate-dependent aminotransferase 0.35 21
Ralstonia solanacearum UW163 0.21 UW163_RS22010 copper resistance protein C 0.51 UW163_RS10995 pyridoxal phosphate-dependent aminotransferase — —
Ralstonia solanacearum GMI1000 0.21 RS_RS20270 copper resistance protein C 0.51 RS_RS10105 pyridoxal phosphate-dependent aminotransferase low > 80
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_5550 Copper resistance protein C precursor 0.52 Pf6N2E2_3173 Aspartate aminotransferase (EC 2.6.1.1) low > 103
Ralstonia sp. UNC404CL21Col 0.21 ABZR87_RS21865 copper homeostasis periplasmic binding protein CopC 0.51 ABZR87_RS14645 pyridoxal phosphate-dependent aminotransferase — —
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_18130 copper resistance protein CopC 0.52 AO356_06565 aminotransferase low > 104
Sphingomonas koreensis DSMZ 15582 0.20 Ga0059261_0449 Uncharacterized protein, homolog of Cu resistance protein CopC 0.29 Ga0059261_1558 Aspartate/tyrosine/aromatic aminotransferase low > 68

Not shown: 2 genomes with orthologs for HEPCGN_04800 only; 45 genomes with orthologs for HEPCGN_00745 only