Conservation of cofitness between PS417_20020 and PS417_04290 in Pseudomonas simiae WCS417

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_20020 cobalamin synthase 1.0 PS417_04290 hypothetical protein 0.27 20
Pseudomonas fluorescens SBW25 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.96 PFLU_RS04345 ribosome-associated protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS21985 adenosylcobinamide-GDP ribazoletransferase 0.96 PFLU_RS04345 ribosome-associated protein low > 109
Pseudomonas sp. RS175 0.75 PFR28_03200 Adenosylcobinamide-GDP ribazoletransferase 0.89 PFR28_00162 hypothetical protein low > 88
Pseudomonas fluorescens GW456-L13 0.72 PfGW456L13_4234 Cobalamin synthase 0.91 PfGW456L13_5025 FIG138315: Putative alpha helix protein low > 87
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.89 Psyr_4155 Protein of unknown function DUF615 low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3672 cobalamin-5'-phosphate synthase 0.89 Psyr_4155 Protein of unknown function DUF615 low > 86
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_02595 cobalamin synthase 0.89 AO353_05210 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.62 AO356_19180 cobalamin synthase 0.90 AO356_07090 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.59 Pf1N1B4_3715 Cobalamin synthase 0.91 Pf1N1B4_1091 FIG138315: Putative alpha helix protein low > 87
Pseudomonas fluorescens FW300-N2E2 0.59 Pf6N2E2_5746 Cobalamin synthase 0.89 Pf6N2E2_3279 FIG138315: Putative alpha helix protein low > 103
Pseudomonas putida KT2440 0.53 PP_1681 cobalamin 5'-phosphate synthase / Cobalamin synthase 0.77 PP_0941 putative ribosome associated protein low > 96
Pseudomonas sp. S08-1 0.46 OH686_04945 cobalamin 5'-phosphate synthase 0.80 OH686_08575 UPF0307 protein YjgA low > 80
Pseudomonas stutzeri RCH2 0.42 Psest_3004 cobalamin 5'-phosphate synthase/cobalamin synthase 0.74 Psest_3319 Uncharacterized protein conserved in bacteria low > 67
Acinetobacter radioresistens SK82 0.41 MPMX26_01610 Adenosylcobinamide-GDP ribazoletransferase 0.21 MPMX26_00549 hypothetical protein — —
Lysobacter sp. OAE881 0.38 ABIE51_RS04985 adenosylcobinamide-GDP ribazoletransferase 0.30 ABIE51_RS06800 ribosome biogenesis factor YjgA low > 62
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS10880 adenosylcobinamide-GDP ribazoletransferase 0.29 ABZR86_RS21710 ribosome biogenesis factor YjgA low > 74
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_05520 adenosylcobinamide-GDP ribazoletransferase 0.28 OKGIIK_10270 DUF615 domain-containing protein low > 52
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1400.1 Cobalamin synthase (EC 2.7.8.26) 0.32 Xcc-8004.1884.1 FIG138315: Putative alpha helix protein — —
Rahnella sp. WP5 0.23 EX31_RS09930 adenosylcobinamide-GDP ribazoletransferase 0.31 EX31_RS12315 ribosome-associated protein low > 89
Escherichia coli ECRC101 0.22 OKFHMN_25130 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 OKFHMN_11930 yjgA ribosome-associated protein — —
Escherichia coli ECRC99 0.22 KEDOAH_02980 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 KEDOAH_16225 yjgA ribosome-associated protein — —
Escherichia coli ECRC101 0.22 MCAODC_20260 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 MCAODC_02435 yjgA ribosome-associated protein — —
Escherichia coli ECRC102 0.22 NIAGMN_22635 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 NIAGMN_09780 yjgA ribosome-associated protein — —
Escherichia coli ECRC98 0.22 JDDGAC_29260 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 JDDGAC_15570 yjgA ribosome-associated protein — —
Escherichia coli ECRC62 0.22 BNILDI_14870 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 BNILDI_07320 yjgA ribosome-associated protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_01716 Adenosylcobinamide-GDP ribazoletransferase 0.32 OHPLBJKB_03801 hypothetical protein low > 73
Escherichia coli ECOR27 0.21 NOLOHH_16040 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 NOLOHH_04190 yjgA ribosome-associated protein low > 57
Escherichia coli BW25113 0.21 b1992 cobS cobalamin synthase (NCBI) 0.32 b4234 yjgA hypothetical protein (NCBI) low > 76
Escherichia coli ECOR38 0.21 HEPCGN_03465 cobS adenosylcobinamide-GDP ribazoletransferase 0.32 HEPCGN_10130 yjgA ribosome-associated protein low > 85
Escherichia coli Nissle 1917 0.21 ECOLIN_RS11625 adenosylcobinamide-GDP ribazoletransferase 0.32 ECOLIN_RS24565 ribosome biogenesis factor YjgA low > 52
Escherichia fergusonii Becca 0.21 EFB2_01897 Adenosylcobinamide-GDP ribazoletransferase 0.32 EFB2_04299 hypothetical protein low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF3968 Cobalamin synthase (EC 2.7.8.26) 0.32 GFF903 FIG138315: Putative alpha helix protein — —
Escherichia coli BL21 0.21 ECD_01901 cobalamin synthase 0.32 ECD_04102 ribosome-associated UPF0307 family protein low > 60
Klebsiella michiganensis M5al 0.20 BWI76_RS18750 adenosylcobinamide-GDP ribazoletransferase 0.32 BWI76_RS02845 hypothetical protein — —
Paraburkholderia sabiae LMG 24235 0.19 QEN71_RS25125 adenosylcobinamide-GDP ribazoletransferase 0.29 QEN71_RS04265 ribosome biogenesis factor YjgA low > 153
Shewanella oneidensis MR-1 0.18 SO1036 cobS cobalamin 5'-phosphate synthase (NCBI ptt file) 0.26 SO4079 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.17 Shew_0715 cobalamin 5'-phosphate synthase (RefSeq) 0.20 Shew_0415 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.16 Shewana3_3277 cobS cobalamin synthase (RefSeq) 0.25 Shewana3_3632 hypothetical protein (RefSeq) low > 73
Shewanella amazonensis SB2B 0.16 Sama_0763 cobalamin 5'-phosphate synthase (RefSeq) 0.27 Sama_0481 hypothetical protein (RefSeq) low > 62
Dechlorosoma suillum PS 0.13 Dsui_0471 cobalamin 5''-phosphate synthase/cobalamin synthase 0.23 Dsui_1235 hypothetical protein low > 51

Not shown: 22 genomes with orthologs for PS417_20020 only; 17 genomes with orthologs for PS417_04290 only